Ectothiorhodospira haloalkaliphila: M911_16780
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Entry
M911_16780 CDS
T03059
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hhc
Ectothiorhodospira haloalkaliphila
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhc03016
]
M911_16780 (gidA)
03036 Chromosome and associated proteins [BR:
hhc03036
]
M911_16780 (gidA)
Transfer RNA biogenesis [BR:
hhc03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
M911_16780 (gidA)
Prokaryotic type
M911_16780 (gidA)
Chromosome and associated proteins [BR:
hhc03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
M911_16780 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Thi4
AlaDh_PNT_C
HI0933_like
Pyr_redox
DAO
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AHK80512
UniProt:
W8KU08
LinkDB
All DBs
Position
complement(3444501..3446393)
Genome browser
AA seq
630 aa
AA seq
DB search
MHYQAQYDVIVVGGGHAGTEAALAAARMGCNTLLLTHNIDTIGQMSCNPAIGGIGKGHLV
KEIDALGGLMARAADQGGIQFRTLNSRKGPAVRATRAQADRSLYKAAVRHGVENQPNLQL
FQQAVDDLIIEGERVTGVITQGGLHFMAPSVVLTVGTFLAGRIHVGEANHAGGRAGDPPA
TRLAERLRELAPRVGRLKTGTPPRLDARSIDFDRVSEQPGDTPTPVFSFIGSAAQHPRQI
SCHITWTTPRTLDIIRDNLHRSPMYSGVIEGIGPRYCPSIEDKVVRFADKERHQIFIEPE
GLDTHEIYPNGLSTSLPFDVQVQVVRSIEGFEQAHIIRPGYAIEYDFFDPRDLKPSLETR
AVQGLFFAGQINGTTGYEEAGAQGLVAGINAARRVRDQDAWCPRRDEAYIGVMIDDLITR
GTGEPYRMFTSRAEYRLTLREDNADLRLTPAGRELGVVDDARWAAFAAKREAIERETARL
ERVTLKPGRVPEDQAQALFGGALTRDCSLLELLRRPGVGYAELTALADAGPPVQDPRVAE
QVEIQVKYAGYIERQKDEVARSRRLEDTALPENLDYQAVAGLSHEVRQKLAEHRPATVGQ
ASRIPGVTPAAVSLLLVHLKKQSMSLKRSA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcactaccaggctcaatacgacgtcatcgtcgtcggcggcggacatgccgggaccgag
gcggccctggcggccgcccgcatgggctgcaacaccctgctgctcacccacaacatcgac
accatcggccagatgagctgcaaccccgccatcggcggcatcggcaaaggccacctggtc
aaggaaatcgacgccctcggcggcctcatggcacgagccgccgaccagggcggcatccag
ttccgcaccctcaacagccgcaagggccccgccgtgcgcgccacccgcgcccaggccgac
cgcagcctctacaaggccgccgtgcgccatggcgtcgaaaaccagcccaatctgcaactc
ttccagcaggccgtggacgacctcatcatcgaaggcgaacgcgtcaccggcgtcatcacc
cagggcggcctgcacttcatggccccctcagtggtgctcaccgtcggcaccttcctggcc
ggtcgcatccacgtgggcgaggccaaccacgcaggaggccgcgccggcgatccccccgcc
acccgcctggccgaacgcctgcgcgaactggcaccacgcgtgggtcgcctcaagaccggc
acaccgccgcgcctggacgcccgcagcatcgattttgaccgggtgagcgaacaacccggc
gacacccccacgcccgtgttctccttcatcggcagcgccgcccagcacccgcgccagatc
agctgccacattacctggaccaccccgcgcaccctggacatcattcgcgacaacctgcac
cgctcccccatgtacagcggcgtcatcgaaggcatcggcccccgctattgcccctccatc
gaggacaaggtggtgcgcttcgccgacaaggaacgtcaccagatcttcatcgaacccgaa
ggcctggatacccacgaaatctatcccaacggcctctccaccagcctgccgttcgacgtg
caggtccaggtggtgcgctccatcgaaggcttcgagcaggcccacatcatccggcccggc
tacgccatcgaatacgacttcttcgacccccgcgacctcaagcccagcctggaaacccgt
gccgtgcaggggctgttcttcgctggccagatcaacggcaccaccggctacgaagaggcc
ggagcccaggggctcgtggccggtatcaatgccgcccggcgcgtgcgcgaccaggatgcc
tggtgcccacgccgggacgaagcctacatcggcgtgatgatcgacgacctcatcacccgc
ggcaccggcgagccctaccgcatgttcaccagtcgtgccgaataccgcctcaccctgcgc
gaggacaatgccgacctgcgccttaccccggccggtcgtgagctgggcgtggtggatgac
gcacgctgggccgcttttgccgccaaacgcgaggccatcgagcgcgagaccgcccggctg
gagcgggtcacactcaaacccggtcgtgtgcccgaagatcaggcgcaggcgctgttcggg
ggggcgctgacccgggactgctccctgctggaactgctgcgccgccccggcgttggctac
gccgaactcactgccctggcagacgccggcccgccagtgcaagacccgcgggtggccgag
caggtggagatccaggtgaaatacgccggctacatcgagcgccagaaggacgaagtggcg
cgttcacgtcgcctggaagacaccgccctgcccgagaatctggactaccaggccgtggcc
ggcctctcccacgaggtgcgtcagaaactggcggaacaccgaccggccaccgtgggacag
gcctcgcgcatccccggcgtgacgcccgctgccgtctccctgctgctggtgcacctcaag
aaacaatccatgagtctcaaacgcagtgcctga
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