Hippoglossus hippoglossus (Atlantic halibut): 117753165
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Entry
117753165 CDS
T07778
Symbol
itgb4
Name
(RefSeq) integrin beta-4
KO
K06525
integrin beta 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117753165 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117753165 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117753165 (itgb4)
04810 Regulation of actin cytoskeleton
117753165 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhip04147
]
117753165 (itgb4)
04515 Cell adhesion molecules [BR:
hhip04515
]
117753165 (itgb4)
04090 CD molecules [BR:
hhip04090
]
117753165 (itgb4)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117753165 (itgb4)
Exosomal proteins of bladder cancer cells
117753165 (itgb4)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin beta subunits
117753165 (itgb4)
CD molecules [BR:
hhip04090
]
Proteins
117753165 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
EGF_2
I-set
Motif
Other DBs
NCBI-GeneID:
117753165
NCBI-ProteinID:
XP_034426966
LinkDB
All DBs
Position
19:13932975..13959953
Genome browser
AA seq
2002 aa
AA seq
DB search
MKEMGRWVLYLSVGLGLLAILLTSCYAEENYCFKARDKSCSECLQAGKDCAYCPDENFDG
PRCDLYENIRAHGCSGAALITAKSERIVMRAQQINMKHSQSQVSPQRMSMSFLPGEEKVV
DVDVFAPTKGPLDLYILMDFSNSMADDLANLKKMGNELSRLIGNLSNDPTIGFGKFVDKV
IEPQTDMRPSKLKTPWPDSDPPFSFQNVIKLTKDVNEFTSKLQKEKISGNLDAPEGGFDA
ILQAAVCGNRIGWRNHSTHLLVFSTESAFHYEADGANVLSGILPRNDERCHLDAVGKYTE
DTKQDYPSIPTLVRVLGKHNIIPIFAVTNHSYTYYKKLQEYFPIAEVGLLQEDSSNILEV
METAFKNIRSKMSIHTEETPKAFKSQFMTTGGQLSEYGNFSFQPGEIGRFKMRLKAQRMI
DETPVCQTNEEDKEGTMRVKPTTFNNAFSIEASILCPTCECEKTPVLKSAKCHSNGDMRC
GKCQCFDGWLGAFCNCSVSSSAQDTSRCKIPGNTEPCSGRGECKQCGGCVCSNPDQFEGP
YCQYDKTQCPRSGGFLCNDRGTCSMGSCVCGKGWSGKACECTNSNQTCLDNKGGICNGVA
KCVCGRCQCNNTGVEMTSTCEPNFQAQLGVCEGTRDCVQCQAWKTGKKEDCKNCPFKITM
VDELKEADKVLDSCSFRDEDDDCTYHYTAENPTDSKNGILDVQVLKKKDCPAASLLWLLP
LLLFLLLLLALLLLCCWKYCACCKTCCQSCLALLPCCRKGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRGPNHPQALMKPNPKETIQFPLSVRLNRLFSEI
LSRPESKEADQLRKEAADNLNEVYKQIPGAQKVQKTAFRMQRNAGKRQDYTIMDTVLSAP
RSSFPDIVKLTEKNVQSGNFQDLKVVPGYYTVATDREASGAIEFQEGVESVDVHVPLFVK
EEDDDKKQLLVEAADVPLGIAEIGKRLVNITIIKEHATSVFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRSRDLTAKDKKDYITVEGDLTYVPGETQKTVPVRLLELVEKDGLL
EDKQVKQFVMDLSNPRQGAKLGRYPRTTVTIADQPEPSVMMFKKGTQNFSTFDPTYTIPV
VRTRNPDSPATVKWRTKKAQRFDLSGLLKFGPGETEKNIVIDPQNHPGPIQPETFHLELF
EPSSNASIGERKTTLVNVTEEALLPSSPGIANMLQKNSAGMKGFPPGGLLLAPGNPEAKA
TGPRNIHLNWDPPPGNPMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVC
AYNSMGEGYNTDMIACQTLEDVPGEPGRLAFNVISRTVTQVSWGEPAETNGNITAYEVIY
TPIDDNLKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAKNSVGWGPFRDASINLA
SQPTRPLSIPIIPDIPIVDAEAGDEYDGYLMYSNEVMKSPGGSKTPSVSGDDFGMNGKWD
QNFLFPGGSATRNLSASSSPMSTLSSNYRAGGGSFTTDTSTTYMSGAGGSRRMDMIGGGV
HTSEVIMRKRSESRGYAEENIRDSIVMGDVSGKFPDLAPSGGFGYTGMQSSSQSQFSYSL
PQVSRSRTQSSDVNEALYSLDRVLQDQRLSPGVPDTPSRLVFSALGPTALKVSWQEPHCE
KELLGYCVLYQLISGGDAKRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGQEREG
VITIESAVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGY
VVTCEQLHGGSDTRSFQVNGDSAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITI
ESQDGGALSQYSNQSMSMREVFQMPTEVSTRTNISHIDNNQSMSMREGFQMPTEVSTRTN
ISHIDNNQSMSMREVFQMPTEVSTRTNISHTMVDDPYFSEGMMMTTQHSETSGMVTRQIT
KEVVERGFIGGTTVTKKMFYES
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagatggggagatgggtgttatatctctcagtggggcttgggcttctagccatc
ctgttgacctcctgttatgctgaagagaactactgcttcaaggcccgggacaagagctgc
tccgagtgcctgcaggccgggaaagactgcgcctactgccctgatgagaactttgacggc
ccgcgctgtgacctgtatgaaaacatacgcgcccacggctgcagtggtgcggctcttatc
acagctaaaagcgaaaggattgtgatgagggcacaacagatcaacatgaagcacagccag
tctcaggtgtctccacagcggatgagcatgagcttccttccaggagaggagaaggtggtg
gacgtggacgtgtttgctccgaccaaaggtcctctggatctttatattcttatggatttc
tccaactccatggctgatgatttggccaacttgaagaagatgggcaatgagctatctcgg
ttgattgggaacctgtcaaatgaccccaccattggctttgggaagtttgttgacaaagtg
attgagccccagacggacatgagaccctccaaacttaaaacgccatggcccgacagtgac
cctccattctccttccaaaacgtcatcaagctgaccaaagatgtgaacgaattcacctca
aagctccagaaggagaaaatatctggcaacctggacgctcctgaaggagggtttgacgcc
atattgcaggctgcagtttgtgggaatagaatcggttggcgaaaccacagcacacatctc
ctggttttctccaccgagtcagccttccactacgaggcagatggcgctaacgtactgtcc
ggcatcctgccacgcaacgacgaacgctgccacctggacgcagtgggcaaatacacagag
gataccaaacaggattacccatcaatacccacgctggtccgcgtgcttggcaaacacaac
atcatccccatatttgctgttaccaaccactcatacacgtactacaagaaacttcaggaa
tatttccccattgctgaggttggtctgctgcaagaggattcctctaacatcctggaggtc
atggagaccgccttcaagaatatccgttccaagatgagcatccatacggaggagacaccc
aaagcgttcaagtctcagttcatgacgaccgggggacaactttcagaatacgggaacttt
agtttccagcctggagaaattggtaggttcaagatgcgtctcaaagcccagaggatgatt
gacgaaacgcctgtctgccagactaatgaggaagataaggaggggacgatgagagtcaag
cccaccaccttcaataacgctttcagcattgaggcctcgattctgtgtccgacctgcgaa
tgtgagaagactcccgtccttaaatcagccaaatgccacagcaatggagacatgaggtgt
gggaagtgtcagtgttttgatggctggttgggtgcattctgtaactgctcagtgagttct
tcagctcaggacaccagccggtgcaaaatcccgggcaatacggagccttgttcaggtcgc
ggggagtgcaagcagtgtggaggctgtgtgtgctccaacccagatcagtttgagggacca
tactgtcagtacgacaagacccagtgtccacgatctggaggcttcctctgcaacgaccgt
ggcacttgctcgatgggtagctgtgtatgtggaaaaggctggagtggaaaagcctgcgag
tgtaccaatagcaaccagacctgtctggacaacaaggggggtatctgcaatggggtagct
aaatgtgtctgcggtcgctgtcagtgcaacaacactggcgtggagatgacttcgacctgt
gagccaaatttccaggcccagctgggcgtgtgtgagggtacaagggattgtgtccagtgt
caagcctggaagacgggaaagaaggaggactgtaagaactgccccttcaaaattaccatg
gtggatgaactcaaagaagcggacaaagtgcttgattcgtgcagtttccgtgacgaagat
gatgactgtacctaccactacactgctgagaaccccacagattcgaaaaatggaatcttg
gacgtccaagtgctcaaaaagaaagattgtcccgctgccagcctcctgtggctgctgcct
ctcctcttgttcctgttgttactgttggcactcctgctgctctgctgctggaaatactgt
gcctgctgcaaaacctgctgccagagctgtcttgcactgctgccttgttgtaggaaaggt
cgcatggtcggcttcaaggaagatgagtatttgctccgccagtctctgctcacctcagac
catctggacacgccaatggtgaggactggtccacccaaagggactgatgtggttcgctgg
aaggtgacagataatgtacacagaggacccaatcacccccaggctctgatgaagccaaat
cctaaagagactatccagttcccactctccgtccggctgaacaggctgttctctgaaatc
ctgtcccgccctgaatccaaagaagcagatcagctccgcaaagaagcggccgataacctc
aatgaggtgtacaaacagattcctggggcccagaaggtgcagaagaccgctttcagaatg
cagagaaatgctggaaaaaggcaggactacaccatcatggacactgtcttgtccgctcct
cgtagcagctttcctgatattgttaaactcacagagaaaaatgtccagtctggaaacttc
caagacctcaaagtggtgcctggctactacactgtggccacagacagagaggcttcggga
gccatcgagttccaggaaggtgtggagtcagtagacgttcatgtgccgctctttgtcaaa
gaagaagacgatgacaagaagcagctgcttgtggaggctgcggatgtgccgctaggcatt
gctgagatcggaaaacgtttggtcaacatcaccatcatcaaagagcatgccaccagtgtg
ttctcgttcctccagccggcctacacatacagcagacaggatggagtggccaacattcca
atcagcagggagatcattgaggatggacgaacacaggtcacataccgctcacgggacctc
acagccaaggacaaaaaggactatataactgtggaaggagacctgacctatgttcctggt
gagacccagaagacagttcctgttcgtctgctggagctggttgagaaagatggcctcctc
gaagacaaacaggtcaagcagtttgtcatggacctcagtaacccacggcagggagcgaag
ctggggcgctacccgagaactactgtcaccatcgcagaccagccagagcccagcgtgatg
atgttcaaaaagggcacccagaacttctccacatttgacccgacctacaccattcctgtg
gtgcgtactcgaaacccggatagccccgccacagtgaaatggcgtacaaagaaggcccag
cgcttcgatctctctggccttctgaagtttggtcctggagaaacagagaagaacatagtg
atcgacccgcaaaaccatcctggtccaatccagcctgagactttccatctggagctgttc
gaaccaagtagcaatgcttctattggagagaggaagaccacccttgtcaatgtcacagaa
gaagctctccttccatcaagtcctgggatcgccaacatgttgcagaagaactccgccggc
atgaaaggcttcccccctggtggtctccttctcgctccaggaaaccctgaagccaaagca
actggacccagaaatattcacctgaactgggacccaccacctggtaacccaatgggctac
aaggtgaagtactggatttacggcgacccagagaaagacgcccaggtcttggatgtgaag
acgcctcaagctgagttgaccaacctctacccctattgcgactacgagatgcgagtgtgc
gcctataattcaatgggagaaggctacaatacagacatgattgcctgtcagaccctggaa
gacgtgcctggtgaaccaggacgtttggcctttaacgtcatcagccggactgtcactcag
gtcagctggggggagcccgcagagacaaacggcaacatcacagcctatgaggtcatctac
acacccatcgatgataacctgaagccggtgggcgccgccaagaaagtaaagatcgacaac
cccaagaaacgaatgctgttgatcgagaaccttcagagcgcccaaacctaccagtacaag
gtccgtgccaagaacagcgtgggctggggtcccttcagagatgcttccatcaaccttgca
tcacagcctaccagaccactgtccattcccattattccagacatccctattgtggatgca
gaggcaggagacgagtacgacggctacctgatgtacagcaacgaggtgatgaagtcccct
ggaggctccaagactcccagcgtctctggtgatgatttcgggatgaatgggaagtgggat
cagaacttccttttcccggggggatcagcgacacgcaacctgtcagcttcatcctctcct
atgtccaccctgagctcgaactacagagcaggaggcggctccttcaccacagacacatcc
accacctacatgtccggagcaggaggctctcgcaggatggatatgattgggggtggagta
catacatcggaagtcatcatgaggaagcgctcggagtccaggggatacgcagaagagaac
atccgggactcaattgtcatgggagatgtgtcgggcaaatttccagatctggcgccatca
ggtggtttcggctacactgggatgcagagcagctctcagagtcagttcagctacagcctg
cctcaggtttccaggtccaggacccagtcttcagatgtcaacgaagccttatatagtctg
gacagggtgctccaggatcaacgactttcccctggggtcccagacacccccagcagactg
gtgttctccgctctgggtcccactgccctcaaggtcagctggcaggagccccactgtgag
aaagaactccttggctactgtgtcctctaccagctgatcagtggaggtgatgcaaagcgc
atcaacgtgacgaacccagcagagaactctgtgatcatccaggacctgctgcccaaccac
tcctacctatttaaggtgaaggctcagagccaggagggctggggccaggaaagagaagga
gtcatcaccatcgagtctgcagtcgatcccaagagtcccctcagcccaatgccaggctca
ccattcactctgagcacccccagtgctccaggccccttggtcttcactgctctgagcccc
gattcgctgcagctcagctgggagaaacctcgcaaacccaacggagacatcctgggctac
gtggtcacctgcgaacagctgcatggtggaagtgacacacgttccttccaggtgaacggc
gacagcgctgagaccagcctcactgtccccaacctgactgagaacattccctacaagttc
aaagttcaggctcgaaccacacagggcttcggtccagagagggagggcatcatcaccatc
gaatctcaagatggaggtgcactgtctcagtacagtaaccagtcaatgtcgatgagggag
gttttccaaatgccaacagaagtcagcacacggaccaacatctcacacatcgacaataac
cagtcaatgtcgatgagggagggtttccaaatgccaacagaagtcagcacacggaccaac
atctcacacatcgacaataaccagtcaatgtcgatgagggaggttttccaaatgccaaca
gaagtcagcacacggaccaacatctcacacaccatggtcgacgacccctacttctcagag
gggatgatgatgaccacacagcactcggagaccagcggcatggtgactcgtcagatcacc
aaggaggtggttgagaggggcttcataggaggaacaactgtcacaaagaagatgttttat
gaatcataa
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