Hippoglossus hippoglossus (Atlantic halibut): 117755041
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Entry
117755041 CDS
T07778
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117755041 (ddx18)
03009 Ribosome biogenesis [BR:
hhip03009
]
117755041 (ddx18)
Enzymes [BR:
hhip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117755041 (ddx18)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117755041 (ddx18)
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
90S particles
Helicases
117755041 (ddx18)
Pre-60S particles
117755041 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
117755041
NCBI-ProteinID:
XP_034430419
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All DBs
Position
21:complement(3206747..3212385)
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AA seq
651 aa
AA seq
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MADLQMKLLRKKIEKRNVKNKERKLLRKQAEDEEAVNTNGLVDEPTTSCVTDEVPKEKQQ
GEEEGGPVEDTTTETKPSQKKKKRKLADTHESPAEKKTKATEEEEEAGVTDEDGEQATDE
VDSAEDEEEDDGTIGGDDGEEDQPELPSGLTGAFEDTSFASLVGLVSDNTLKGVKEMSFE
HMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNGTGVVVLSPT
RELAMQTYGVLKELMTYHVHTYGLVMGGSNRSAEAQRLVNGVNLLVATPGRLLDHLQNTP
GFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSATQTRKVEDLARISLK
KEPLWVGVDENKDNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKF
HYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQY
DPPDDPTEYIHRVGRTARGINGSGHALLILRPEELGFLRFLKQAKVPLSEFEFSWSKISD
IQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNLPMVSASFGFKVPPY
VDLNSHSTRGVKIQKRGGGGGFGFQKSKFGQKSRVFKHVNKGRGDKRQFSR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgcagatgaagctgctgcgcaagaagattgagaagagaaacgtgaagaac
aaggagcggaagctgctgaggaaacaggcagaagacgaggaggccgtaaatacaaacggg
ctggtagacgaaccaacaacctcctgtgtgacggacgaggtgcccaaggagaagcagcag
ggggaggaggaggggggaccagtggaagacaccaccacagagacaaaaccatctcagaag
aagaagaaacggaagctcgctgacactcatgaatcaccagctgagaagaagaccaaagca
acagaggaggaggaggaagcaggagtaacagatgaggatggagaacaggctactgatgag
gtagattcagctgaagatgaggaggaggatgacggtactattgggggagatgacggagag
gaagatcaaccagagttaccatctggtctaacaggagcgtttgaggacacgtcgtttgcc
tctcttgttgggctggtgagcgacaacaccctgaagggagtgaaagagatgagctttgaa
cacatgactgagattcagcataaaagcatccgtcccctgctggaaggaagggacgtgctc
gctgcagcgaagacaggcagtggtaaaaccttggccttcctgatcccgtctatagagctc
atctacaaactcaagttcatgcccaggaatggtactggtgtggtggtactttcacccaca
cgtgagttggcgatgcagacctacggcgtgctgaaggagctgatgacgtatcatgtgcac
acctacggtctggtgatgggaggcagcaaccgctcagctgaggcccaaagactcgtcaat
ggtgtcaacctcctggtggccacacctggtcgtctgctggaccatctacagaatactccc
gggttcatgtacaagaacctccagtgtctgattattgacgaggccgaccgcatcctggag
gtgggcttcgaggaggagctgaagcagatcatcaaactgctgccgaagaagaggcagacc
atgctgttttctgccactcagacccggaaggtggaggacttggctcgcatctcgctgaag
aaagagcccctgtgggtcggggtggatgaaaacaaagacaacgcgacggttgatggcctc
gagcagggttatgtggtgtgcccatcagagaagagattcctgctgctcttcaccttcctg
aagaagaaccgcaagaagaagctgatggtcttcttctcttcttgtatgtctgtgaaattc
cactatgagctgctcaactacatcgacctgcctgtattggccattcatgggaagcagaag
cagaccaaacgtaccaccaccttcttccagttctgcaacgcggattcaggcatcctgctg
tgcacggacgtggccgctcgaggtctggacatccctgaggtggactggatcgtccagtat
gaccccccagatgaccccacggagtacatccacagggtcggcagaacggcccgaggcatc
aacggcagcggccacgctctcctcattctccggccagaggagctcggcttcctacgcttt
ctcaaacaggccaaggtcccactgagcgagtttgaattttcctggagtaaaatctctgat
atccagtctcagctggagaaactgatcgagaagaactactacctccacaagtcggcgcag
gaagcctacaagtcgtacgtgagggcttacgactcccactcgctcaaacagatctacagc
gtcaacacgctcaacctgccgatggtgtcggcctcgttcggattcaaagtgccaccatat
gtcgacctgaactcccacagcaccagaggtgtaaagatacagaagcgaggaggcggcggt
gggtttggattccagaagtccaagtttgggcaaaaatcccgagtcttcaagcacgtcaac
aaaggaagaggcgacaagaggcagttctcccgctga
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