Hippoglossus hippoglossus (Atlantic halibut): 117772375
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Entry
117772375 CDS
T07778
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhip03016
]
117772375 (tyw1)
Enzymes [BR:
hhip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
117772375 (tyw1)
Transfer RNA biogenesis [BR:
hhip03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117772375 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Adaptin_binding
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
117772375
NCBI-ProteinID:
XP_034459360
LinkDB
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Position
13:complement(3083997..3132029)
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AA seq
753 aa
AA seq
DB search
MLSLIFVFLLFAGRVSASDAKVSQDEHRHTESFLTSLWHNRLYLYSAAALVFGVWFSLKV
ALKKKSFSKPVGPWVYKAVQNNDRPDSVEYVSGVKIFYGSQTGTAKGFAKELSEEVKTLG
IPAEVTDMKDYDPDDRLADECTSKSVCVFLVATYTDGQPTENAEWFCKWLEEASTDFRYG
KTFLKGLRYAVFGLGHSVYEGHYNTVGTNVDKWLWMLSGMRIMTRGEGDCNVVKSRNGSI
QADYQAWKGKFLDRLQALAKGEKKSGSRDSKTGGSCKNQREDGHVVEEQEEEEKAAPQEV
SSEEELLESSSDEDESGLQDEKKSGSVVDMEDLGNIMNSMKKAKSKEEGRGGGQMVKLSK
LNGVKKTEDEEERREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTF
YGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQEAVEKHQSLIRQ
FRGVPGVKPERYEEGLAVKHCALSLVGEPIMYPEINTFIRLLHSQRISSFLVTNAQFPEE
IRTLVPVTQLYVSVDASTRDSLKKIDRPLFKDFWPRFLDSLKALGEKRQRTVYRLTLVKA
WNVEEMLSYSELISVGQPDFIEVKGVTYCGESSASTLTMANVPWHQEVVAFVQQLADMLP
QYEIACEHEHSNCLLIAHTKFKVAGEWWTWIDYERFQELVRAHEESGGQRSFSALDYTAK
TPGWALFGASEQGFDPTDTRFQRRNKTKDISGC
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcctcatcttcgtcttcctcctcttcgcggggcgcgtgtcggcctcggacgct
aaagtttctcaggatgagcacagacacaccgagagcttcctcacgtccctgtggcacaac
cgactctacctgtactcggctgcggctctggtgttcggggtctggttctccctgaaggtg
gctctgaagaagaaaagcttctccaagcccgtcggtccgtgggtctacaaagctgtgcag
aacaacgaccgccctgactctgtggagtacgtgtcgggagttaagatcttctacggttca
caaactggaacagcaaagggtttcgcaaaagagctgtcggaagaggtgaagactttggga
ataccagcggaggtgactgacatgaaagactacgatccagatgatcgactggctgatgag
tgcaccagtaagtcggtctgcgtgttccttgtggccacgtacacggacggacagcccaca
gagaacgcagagtggttctgtaagtggctggaggaggcgtccactgacttccgatacggg
aagaccttcctcaaaggcctcagatacgcagtatttggtctgggccactctgtctacgaa
ggccactacaacacggtgggtacaaatgtggacaagtggctctggatgctgagcggcatg
cggatcatgacccgaggggagggcgactgtaacgtggtgaaaagccgtaatggcagcatc
caggcagactaccaggcctggaaggggaagttcctggaccggctacaggccctggccaag
ggagagaagaagagcggcagcagggactctaaaaccggaggctcctgtaagaatcagaga
gaagatggacacgtggtggaggagcaggaggaggaggagaaggcagcgccgcaggaagtc
agctccgaggaagaactgttggaatccagcagtgatgaggacgagtcagggctgcaggat
gagaagaaatccggttcagtggtggacatggaggatctgggcaacatcatgaacagcatg
aagaaagccaagagcaaagaggagggtcgaggaggcggacagatggtgaagctgtcgaag
ctgaatggagtgaagaagactgaggatgaagaggagaggagagagatgatcaccccggcc
ctgagagaggcactgaccaaacaaggctacaaactaattggaagtcactcaggagtgaag
ctttgtcgatggaccaagtctatgttgcgagggagaggaggctgctacaaacacactttc
tacgggatcgagtcccaccgctgcatggaaacgacccccagcctcgcctgcgctaacaag
tgcgtcttctgctggagacatcacaccaacccggtgggcacagagtggcgctggaagatg
gacccagcagagaaaatcctgcaggaggccgtggagaagcaccagagcctcatccgacag
ttcagaggggtgcctggcgtgaagcccgagcgctacgaggagggtttggcagtcaagcac
tgtgccctctccctggtgggcgagccaatcatgtaccccgaaatcaacaccttcatccgc
ctcctccactcccaacgcatctccagtttcctggtcacaaatgcacagtttccagaggaa
atcaggaccctggtgccagttacccagttatacgtgagtgtggacgcgagcaccagagac
agcctgaagaagattgaccggccgcttttcaaggacttctggccacgtttcctggacagc
ctcaaggccctgggagagaagagacagaggacggtgtacaggctgacgctggtgaaggcc
tggaacgtggaggagatgctgtcgtactcggagctcatttctgtgggtcagccggacttc
attgaggtcaagggggtgacgtactgtggggagagctctgccagcaccctgaccatggcc
aacgtcccctggcaccaggaggtggtcgccttcgtccagcagctcgccgacatgctgcct
cagtacgagatcgcctgcgagcacgagcactccaactgtttgctcatcgcacacaccaag
ttcaaggtggccggcgagtggtggacgtggatcgactacgagcgtttccaggagttagtc
cgggcccacgaggagagcgggggccaacggagcttctcggccttggactacaccgctaag
acccccggctgggctctgttcggagcctccgagcagggattcgacccgacggacacgcgc
ttccaacgacgcaacaaaaccaaagacatctcaggatgctga
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