Halorhodospira halochloris: HH1059_21220
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Entry
HH1059_21220 CDS
T06158
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
hhk
Halorhodospira halochloris
Pathway
hhk02020
Two-component system
hhk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HH1059_21220 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HH1059_21220 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhk03021
]
HH1059_21220 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hhk02035
]
HH1059_21220 (fliA)
Transcription machinery [BR:
hhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HH1059_21220 (fliA)
Bacterial motility proteins [BR:
hhk02035
]
Flagellar system
Flagellar assembly proteins
Stator
HH1059_21220 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
BAU58832
UniProt:
A0A0X8XBT7
LinkDB
All DBs
Position
complement(2341726..2342469)
Genome browser
AA seq
247 aa
AA seq
DB search
MNGHAMYTAVASQGDEDLVTRHASLVKRIAHHLASRLPASVQLEDLIQAGMIGLLEAARQ
YDSSQGASFQTYAGIRIRGAMLDEIRRLDWTPRSVHRKGRDVAEAVRQIEHRTGRDARDH
EVAEAMGISIAEYHSILQDVSTARVFSIDQEDPNTGEVHEPQGSDPGPLVILQDDAFQAE
LAEAIRELPERERLVMALYYDEELNLREIGEVLEVSESRVSQIHGRIMLKLRNRLADWTR
ENQQRTA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcacgccatgtacacggcagttgcctcacagggcgacgaagacctggttacc
cgtcatgcctctctggttaaacggatagctcaccacttggctagtcgtttaccagccagt
gtgcagctggaggacctcattcaggcaggcatgatcggcttgttagaggcggcgcggcag
tatgattcctcacaaggggcaagcttccagacctatgctgggatacgcatccgaggcgcc
atgctggatgagatccgccggcttgattggacgccgcgctctgtgcaccgcaaggggcgt
gatgttgccgaggcggtcaggcaaattgaacacagaactggacgcgatgctcgcgaccat
gaggtcgccgaggcaatgggaatttccattgcggaatatcatagtattctgcaggatgta
tcgacagcgcgcgtgttcagcatcgatcaggaagaccccaacaccggcgaggttcatgag
ccgcaaggcagcgaccctgggccgttggtcatacttcaggatgatgcgtttcaagctgag
ttggccgaggcgatacgcgaattgccggaacgcgagcgtttggtgatggctttatattat
gatgaagagctgaatctacgcgagattggtgaagtacttgaggtctcggagtcacgggtc
agccagattcacggccgcatcatgcttaaattgcgcaaccgtctggctgactggactcga
gaaaaccagcaacgaacggcgtga
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