Halobacteroides halobius: Halha_2073
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Entry
Halha_2073 CDS
T02401
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hhl
Halobacteroides halobius
Pathway
hhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Halha_2073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhl03400
]
Halha_2073
DNA repair and recombination proteins [BR:
hhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Halha_2073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
SelO
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGB41967
UniProt:
L0K9J9
LinkDB
All DBs
Position
complement(2073858..2076224)
Genome browser
AA seq
788 aa
AA seq
DB search
MDKHALEVLEFDKIKEQLREHTTSKIGNHLVEKLSPSTDLEFIESRQQEVTEATKILSRE
SAPPFGGIYDIRSALKKVEKGAILGADELLDILITITSGKKLRSYFLGLEDEDNEYVRIL
KISSQIETFSNLEQKIRKAVDNQGQIKDSASSKLADLRRKIRNTSDRIKNKLNSILNSNR
YQSYIQESVVTIRDQRYVIPVKAAKQSDFPGIIHDKSASGQTVFIEPMPVVEINNKLQQL
RSEEEEEIKRILQELSIEVEKRLQPIKETIKVLAVLDFIFAKAKYSIELEASEPILNSKG
QINLIKARHPLLTEDVVPIDVQLGDNFASLVITGPNTGGKTVSLKTIGLLTIMGQAGLHV
PALSGSKLAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASINSLVLLDELGAGT
DPVEGSALARGILDYLHQQGAKTVATTHYSELKTYAYNQDGVENASVEFDVETLAPTYNL
QMGLPGRSNAFQIASRLGLSDEIIDKASQFLDQEDIELDNIIKQIEEDKREYQQKKESAQ
ENKRQARELREEYEAKLKKLEAQKEREMKEAYREANKIIKRAQQKANKIIDELKEQRQLN
DRKIEGARSELREERKDLKEERQELIEAKREQKEVPDIKVGDKVKLSNLNQKGKVLEIHS
GKEEALVQAGIMKVTVDLRELEKTTIESKTNNNTRVNISQVKSNKAKNISPELDLRGLRV
VEAKNKLDKYLDDALLANLNQVEIIHGKGTGTLREVVDEMLKNYRNIKDYRLGRPKEGGT
GVTIVNLG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggataagcatgctttagaggtattagaatttgataaaattaaagaacaattgcgtgaa
catacaacctctaaaataggaaatcatttagttgaaaaattaagtcctagtacagattta
gaatttattgaatctagacaacaagaagttactgaagctactaaaattttgagtcgagag
agtgcacctccatttggtggaatttatgatattcgttctgctctaaagaaggtggagaaa
ggagctatcttaggtgcagatgaattattagatattttaattactattacttcggggaag
aaattaagaagttattttttaggattagaagatgaagataatgaatatgtaagaattcta
aagatcagtagtcaaattgaaaccttttcaaatttggaacagaaaataaggaaagctgtt
gataatcagggccaaataaaagattccgccagttctaaactagctgatctaagacgaaag
attagaaatactagtgatcgaattaagaataaattaaattcaattcttaattctaatcgt
tatcaatcatatattcaagagtctgtagttactatcagagatcaaagatatgtaattcca
gttaaagctgccaaacaaagtgattttccagggataattcatgacaaatcagctagtggc
caaactgtatttatagaacctatgccagtagtagagatcaataataaattacaacagtta
agatcagaggaagaagaagagattaaacgtattttacaggaattatctattgaagtagaa
aaaagattacaaccaattaaagaaaccattaaagttttagcagtattagattttattttt
gctaaggctaaatatagtattgaactagaagcttcagagccaattttaaactctaaaggt
cagattaatttaattaaagctcgtcatcctttattaactgaagatgtagtaccaattgat
gttcaattaggtgataattttgccagtttagtaattacaggacctaatacaggtggaaag
acagttagtttaaaaacgattggtttattaactattatgggccaagctggattgcatgtg
cctgctttatctggttccaaattagctatttttaatcaagtctatgctgatattggagat
gaacaaagtatcgaacagaatttaagtactttttcttctcatatgacacaaataattaaa
atagtagaacgagccagtattaactctttagttttattagatgaattaggagctggaaca
gacccagtagaaggttcagctttagctcgaggaattttagactatttacatcagcaagga
gctaaaacggttgctactactcattatagtgaactaaaaacttatgcttataatcaagat
ggagtagagaatgcttcagttgaatttgatgtagagactttggccccaacttataattta
caaatgggattaccaggtcgtagtaatgcttttcagatagcgagtcgattaggtctaagt
gatgagattatagataaggccagtcaatttttagaccaagaagatatagaattagataat
attattaagcagatagaggaagataaacgagagtatcagcaaaaaaaagaatcagctcaa
gaaaataaacgtcaagctagagaattaagagaggaatatgaagctaaattaaaaaaatta
gaggcacaaaaagagcgggaaatgaaggaagcatatcgagaagcaaataaaattattaaa
cgagctcaacagaaagcaaataaaattattgatgaattaaaggagcaaaggcaattaaat
gaccgtaagattgaaggtgctagaagtgaattgcgagaagagagaaaagatcttaaagaa
gaacgacaggaactaatagaagctaagagagaacaaaaggaggttcctgatataaaagtt
ggagataaagttaaactaagtaatttgaatcaaaaaggaaaggtattagaaattcactct
ggtaaagaagaagcattagtacaagcaggaattatgaaggttacagttgatttaagagaa
ctagaaaagactactatagagtctaaaacaaataataatactagagtaaatataagtcag
gttaaaagtaataaggctaaaaatatatctcctgagttagatttaagaggcctaagggtt
gtagaagctaaaaacaagctagataaatatttagatgatgcattattagctaatttaaat
caagtagaaatcattcatgggaagggtactggaactcttagagaagtggttgatgagatg
ttaaagaattatcggaatataaaagattatagattaggtaggcctaaggaaggtggcact
ggagtaacaatagttaatttgggataa
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