Haloarcula hispanica N601: HISP_06830
Help
Entry
HISP_06830 CDS
T02949
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hhn
Haloarcula hispanica N601
Pathway
hhn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HISP_06830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhn03000
]
HISP_06830
03021 Transcription machinery [BR:
hhn03021
]
HISP_06830
Transcription factors [BR:
hhn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HISP_06830
Transcription machinery [BR:
hhn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HISP_06830
RNA polymerase III system
TFIIIB
HISP_06830
RNA polymerase I system
SL1/TIF-1B
HISP_06830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
AHB65738
UniProt:
V5TKV6
LinkDB
All DBs
Position
1:complement(1296395..1296955)
Genome browser
AA seq
186 aa
AA seq
DB search
MVDPKESIDIENVVASTGIGQELDLESVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHQSLRIVFDKLRDLNIQVDDDPEIVVQNIVSSADLGSSLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPDVVALLFGSGKLVVTGGKRKEDAEEAVDTIVERLS
DLGLLD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacccaaaagagagcattgacatcgaaaatgtcgttgcttcgaccggtatcgga
caagaactcgaccttgagagcgtcgcgatggacctggagggggccgactacgaccccgag
cagttcccgggcctcgtctatcggacacaggaccccaaatccgccgcgctcatcttccgg
tcgggcaagatcgtctgcacgggtgcgaaatccacggacgacgtccaccagagcctgcgt
atcgtcttcgacaaactccgcgacctgaacatccaggtcgacgacgaccccgaaatcgtc
gtccagaacatcgtcagttccgcggacctcgggagttcgctcaacctcaacgccatcgca
atcggcctcggcctcgagaacatcgagtacgagccggagcagttcccgggcctcgtctac
cgactggacgagcccgacgtggtcgcgctgctgttcggttcggggaagctcgtcgtcacc
ggcgggaagcgaaaggaggacgcggaggaagccgtcgacactatcgtcgagcgactcagc
gatctcggcctgctggactaa
DBGET
integrated database retrieval system
