Helicobacter pylori Shi417: HPSH417_07400 Help Entry HPSH417_07400     CDS       T02039                                  Name (GenBank) type III restriction enzyme   KO K01156   type III restriction enzyme [EC:3.1.21.5] Organism hhr  Helicobacter pylori Shi417 Brite KEGG Orthology (KO) [BR:hhr00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02048 Prokaryotic defense system [BR:hhr02048]     HPSH417_07400 Enzymes [BR:hhr01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters     3.1.21.5  type III site-specific deoxyribonuclease      HPSH417_07400 Prokaryotic defense system [BR:hhr02048]  Restriction and modification system (R-M system)   Type III R-M system    HPSH417_07400 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RE_endonuc ResIII DEAD Helicase_C Motif Other DBs NCBI-ProteinID:  AFH98596 LinkDB All DBs Position complement(1525499..1528414) Genome browser AA seq 971 aa AA seqDB search MKIKFKRLDYQEKCLNQILGVFKGIYLREPENDAQRISNPVFEIGEIKDLLLENIQNLQS EQKITQKSVRIDKSLNCDILMETGTGKTFCFLEGVYALHQNYHLSKFIVLVPSNAIKLGV LKSVEITREFFKSEYSTHLESYEDIRSFILASNHKCCVLVMTFSAFNKEGNVIHKSCIEN TNLFNGAKSYMQALASIRPVVIMDEPHRFLGNQTKKYLEQLNALVTLRFGATFKDDYKNL IYALDSKKAFDCALVKSISVASVGESNEYFLELKGVVKTQNDYEAAINYTNLENKTQSVK VKKHDNLGTLTQISALEDCIVENITKTEVRFLNGFNLLLDQKEPFSHLLEGEQEVMLKEA IKSHFEREEGLFKKGIKALCMVFISGVNSYLSENEKPAKLALLFEKLYQQKLEEVLKKDD LDENYRAYLERTKDNIQKVHGGYFAKSKKESDEAQVIALILKEKEKLLSFESDLRFIFSQ WALQEGWDNPNVMTICKLAPSHSNITKLQQIGRGLRLAVNDKGERITKEHADFDFVNELV VIVPQVEGDFVGAIQQEISEHSLIKQAFSGEELEKSGIVEKGYYGFLLETLEGLGFGEKT DNENFKLTLNQNEFLEKKPELEKLKDKKYLNLEKLKDFLKDRLVGHSRVGNKNERKSEKI KINKENFKKFETLWESLNHQARIAYAIDSESLIDEIVTKINASFNVKSKIVSVTTHKKVE TMGNDAKTESFEQKSACVWSLHEFISTLSNKVKLSFKSVAKVLENIDENKFELIKKNEQE SLRRLEELFLEIIYQNIKDKISYQMRETTVKNRKNDAFYDEKGEIREFLDGSLRGYKYEI KNSSIQEKCLYENFMQVESDIEEDTIKESNDTKIIVFGKLPRVKIPIGLNQTYSPDFGYV VENNDKKVLLVVETKGVENESELREEEKRKISTAKKFFKALKKQGVNIEYKTKIKKDQLS ALINEVLNRKD NT seq 2916 nt NT seq  +upstreamnt  +downstreamnt atgaaaatcaaattcaaacgattggattatcaagaaaaatgcttgaatcaaattttaggg gtgtttaaggggatttatttgagagagccagaaaatgacgctcaaaggatttctaaccct gtttttgaaataggggagatcaaagatcttttattagaaaatatccaaaatttgcaatca gagcaaaaaataacccagaaaagcgtgaggattgacaagtcgttaaactgcgatatttta atggaaacaggcaccgggaagaccttttgctttttggaaggcgtttatgccttgcatcaa aactaccatttgtcaaaatttatcgttttagtgccaagcaacgccattaaattaggggtt ttaaagagcgttgaaatcaccagagaattttttaaaagcgagtattctacgcatttggaa agctatgaagatataaggagctttattctagcgagcaatcacaaatgctgcgtgttggtg atgactttttctgccttcaataaagagggtaatgttatccataaatcatgcatagaaaac acgaatctattcaatggcgcaaaaagttacatgcaagctttagcgagtattcgcccggta gtgatcatggacgaaccgcaccgatttttaggcaatcaaacaaaaaaatatttggaacaa ttaaacgctttagttacgctcaggtttggggcgacttttaaagatgattataagaatttg atttatgcgctagatagcaaaaaagcgtttgattgcgccctagtgaaaagcattagcgtg gcgtccgtgggggagagtaacgagtattttttagagcttaagggggttgtaaagacacaa aacgactatgaagctgcaattaactacacgaatttagaaaataaaactcaaagcgtcaag gtcaaaaagcatgataatttaggcacgctaactcaaatcagcgctttagaagattgcatt gtagaaaacatcactaaaactgaggttcgttttctcaatggctttaatttgttactggat caaaaagagcctttttctcatcttttagagggcgagcaagaagtgatgctgaaagaagcg ataaaaagccattttgaaagagaagaagggctttttaaaaaggggattaaagccttgtgc atggtgtttattagcggggtgaatagctatttaagcgagaatgaaaagccggcgaaatta gcccttttatttgaaaaactctaccagcaaaagcttgaagaagtcttaaaaaaagatgat ttagatgaaaattacagagcgtatttagaacgcaccaaagacaatattcaaaaagtgcat ggagggtattttgctaaaagcaagaaagagagcgatgaagcccaagtgatcgcgctcatt ttaaaagaaaaagaaaaattgctgagttttgaatccgatctcaggtttatcttttcgcaa tgggcgttgcaagaggggtgggataaccctaatgtgatgacgatttgcaaattagcccct agccattccaatatcactaaattgcaacaaatcggtagggggttaaggctcgctgtgaat gataagggcgaacgcatcactaaagagcatgctgattttgattttgtcaatgaattggtg gtgatcgtgccgcaagttgagggggattttgtgggagcgatccagcaagagataagcgag catagcttgattaaacaagcgtttagtggggaagagttagaaaaaagcggcattgttgaa aaagggtattacgggtttttattggaaacattagagggtttgggttttggagaaaaaaca gataatgaaaactttaaactcactctcaatcaaaacgaatttttagaaaaaaagccagaa cttgaaaaattaaaagataagaaatacctgaatcttgaaaaattaaaagattttttaaaa gatcgtttagtgggccattctagagtggggaacaaaaacgagcgaaagagtgaaaaaatc aaaatcaataaagaaaattttaaaaaatttgaaaccttatgggagagtttgaatcatcaa gcccggatcgcttatgccattgatagcgagagcttgattgatgagattgtaacaaagatc aacgcttcttttaatgtcaagtcaaaaatcgtttcggttacgactcataaaaaagtagaa actatgggaaatgacgccaaaacagagagttttgagcaaaaaagcgcatgcgtgtggagc ttgcatgaatttatcagcaccttgtctaataaggtgaaattgagttttaaaagcgtggct aaagtgttggaaaacattgatgaaaacaagtttgagctaattaaaaaaaacgaacaagag agcttaaggcgtttagaagagctgtttttggaaattatttatcaaaatattaaagataaa atttcctatcaaatgcgcgaaacgacggttaaaaacagaaaaaacgatgcgttttatgat gaaaaaggggaaattagagaatttttagacgggagtttgagggggtataaatatgagatt aaaaattcaagcattcaagaaaaatgcctgtatgaaaatttcatgcaagtggagagcgat attgaagaagacacgattaaagaatctaacgacactaaaatcattgtttttggcaagctc cctagggttaagatcccgatagggttaaatcaaacttatagccctgattttgggtatgtg gttgaaaacaacgataaaaaagtgttgttagtggtagaaactaagggggttgaaaatgaa agcgaattgcgcgaagaagaaaagcggaaaatttcaaccgctaagaaattttttaaagct ttaaaaaagcaaggcgtgaatattgaatacaaaaccaaaattaaaaaagatcaattaagc gcgttgattaatgaagttttaaatcgtaaagattag

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