Herbaspirillum hiltneri: F506_22345
Help
Entry
F506_22345 CDS
T04039
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hht03016
]
F506_22345 (gidA)
03036 Chromosome and associated proteins [BR:
hht03036
]
F506_22345 (gidA)
Transfer RNA biogenesis [BR:
hht03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
F506_22345 (gidA)
Prokaryotic type
F506_22345 (gidA)
Chromosome and associated proteins [BR:
hht03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
F506_22345 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_oxidored
FAD_binding_2
Pyr_redox_2
DAO
AlaDh_PNT_C
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AKZ65030
LinkDB
All DBs
Position
complement(4937392..4939326)
Genome browser
AA seq
644 aa
AA seq
DB search
MLFPTHFDVIVVGGGHAGTEAALASARMGQTTLLLTHNIETLGQMSCNPSIGGIGKGHLV
KEVDAMGGAMAIATDEAGIQFRILNSSKGPAVRATRAQADRILYKQAIRSRLENQPNLWL
FQQAVDDLMVEGDRVIGAVTQAGIRFAGRAVVLTAGTFLDGKIHVGLNNYSAGRAGDPPA
ISLSARLKELKLPQGRLKTGTPPRIDGRSIDFSVLEEQPGDLDPIPVFSVMGNVGMHPQQ
MPCWITHTNTQTHDIIRAGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFAGKDSHQIYLEP
EGLTTNEFYPNGISTSLPFDVQLALVRSMRGMENAHILRPGYAIEYDYFDPRGLKSSLET
RQIQGLFFAGQINGTTGYEEAAAQGMLAGLNAALQTQGRESWTPRRDEAYLGVLVDDLIT
QGVQEPYRMFTSRAEYRLSLREDNADLRLTEIGRQLGCVGDAQWEMFDKKREAVAREMER
LKSTWVNPRILADAEAERVLGKAIEREYNLVDLLRRPNVTYDSLMTLTGADGQALAGPGV
SDDPVREQIEIQIKYAGYIDRQAKEIGRQEHNESLKLPADLDYMDVQALSIEVRQKLNKH
KPETLGQASRISGVTPAALSLLLVHLKKGGLKNVAVSDNHNEAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctatttcccacacactttgatgtcattgtcgtcggcggcggtcacgccggtaccgaa
gctgcattggcatccgcccgcatggggcaaacgactttgctgctgacccacaacatcgag
accctcggtcagatgtcgtgcaatccttccattggcggcatcggcaagggccacctggtc
aaggaagtcgacgccatgggcggggcgatggcgattgcgacggacgaggcgggtatccag
ttccgcatcctgaattcctccaaaggtcctgccgtacgcgccacgcgcgcccaggccgac
cgcatcctgtacaagcaggcgattcgttcgcgcctggaaaaccagcccaatctgtggctg
ttccagcaggcggtggacgacctgatggtcgaaggcgaccgcgtaatcggcgccgtgacc
caggccgggatccgctttgcgggcagggcggtggtgctgacagcgggtactttcctcgac
gggaagatccacgtcggcctcaataattactccgccggccgcgccggcgacccgccggcg
atctcgctgtcggcgcgcctgaaagaactcaagctgccgcaaggccgcctgaaaaccggt
acaccaccgcgcatcgacggccgcagcatcgacttttcagtcctggaagagcagcccggt
gacctcgatcccatcccggtattctcggtcatgggcaatgtcggcatgcatccgcaacaa
atgccatgctggattacccataccaacacccagacccacgacatcatccgtgccggtctc
gaccgcagcccgatgtacaccggcgtgatcgaaggagtcggtccgcgttattgcccgtcg
atcgaagacaagatccaccgcttcgccggcaaggattcgcaccagatttacctggagccg
gaaggcctgacaaccaacgagttctaccccaacgggatctccaccagcctgccgttcgac
gtacagctggcgctggtgcgttcgatgcgcggcatggaaaacgcccacatcctgcgcccg
ggctacgccatcgagtacgactacttcgatccgcgcggcctgaaatcttcgctggaaacg
cggcaaatccagggcttgttcttcgccggccagatcaacggcaccaccggttacgaagaa
gcggcagcccaaggcatgctggccggtctcaacgccgcgctgcaaacacagggccgcgag
tcctggacgccgcgccgtgacgaggcttacctcggcgtgctggtcgacgacctgattacc
cagggcgtgcaggagccgtatcgtatgttcaccagccgcgccgaatatcgcctgagcctg
cgcgaagacaacgccgacctgcgcctgaccgaaatcggccgccagctcggttgcgtcggc
gacgcccaatgggaaatgttcgacaagaagcgcgaagctgttgcacgtgaaatggagcgc
ctcaaatccacctgggtcaacccgcgcatcctcgccgacgccgaagccgagcgcgtgctg
ggcaaagccatcgagcgcgaatacaacctggtcgatctgctgcgccgtccgaacgtaacc
tacgacagcctgatgacgctgaccggcgccgacggccaggcgctggcgggtccgggcgtc
agcgatgacccggtgcgcgaacagatcgagatccagatcaagtacgccggctacatcgat
cgccaggccaaggaaatcggacgccaggaacacaacgaaagcctcaagctgccggccgac
ctcgattacatggacgtccaggcgctgtcgatcgaagtgcgccagaagctcaacaagcac
aagccggaaaccctgggccaggcttcgcgcatttccggcgtgacgccggcggccttgtcc
ctgctgctggtccacctgaaaaaaggcggcctgaagaacgtcgccgtgtccgacaaccac
aacgaagcggcctga
DBGET
integrated database retrieval system
