Halomonas huangheensis: AR456_01840
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Entry
AR456_01840 CDS
T04119
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hhu
Halomonas huangheensis
Pathway
hhu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AR456_01840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhu03400
]
AR456_01840
DNA repair and recombination proteins [BR:
hhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AR456_01840
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AR456_01840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_22
BCA_ABC_TP_C
NACHT
T2SSE
Viral_helicase1
cobW
MeaB
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ALM51171
UniProt:
W1N270
LinkDB
All DBs
Position
complement(385866..388760)
Genome browser
AA seq
964 aa
AA seq
DB search
MDKILVRGARTHNLKHIDVELPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGTPRC
PEHGEDLEAQTISQMVDQVLTLPEGSKLMLMAPVVSGRKGEHLQLLAELRAQGFVRAMID
GQVLELDDIKPLDKNRKHDISVVVDRIKVREGLEQRLAESFETALGLADGTAMVHFMDGE
QPDITFSARFACPVCGYSIPELEPRMFSFNNPAGACPTCDGLGVEQFFDPDKLISHPELS
LAEGVIKGWDRRSVYYFNQLKSVAEHYRFTLETSWQDLARHERDVILHGSGTDEIAFIYV
NDRGKKVTREHTFEGVLPNMQRRYRETESSMVREELSRYIAVQPCQTCEGARLRKEARHV
FVDGTTLPDVVRLPIGEAQQYFSELSLPGRKGEIALKIINEISARLEFLVNVGLDYLNLE
RSAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLQTLVRLRDLGNTV
IVVEHDEDAIRAADHVLDIGPGAGVHGGQIVAQGTPQQIMDNEHSLTGQYLCGSREIAVP
PWRIPGNPEKMLKLTGATGNNLQDVTLELPLGLLVCVTGVSGSGKSTLINSTLMPIAARE
LNRATTLTPSPYTGIEGLDQLDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVKGGRCEACQGEGMIKVEMHFLPDIYVPCDVCKGKRYNRETLDIQYK
GKTIDEVLGMTVEEALEFFSPVPAIARRLQTLVDVGLTYIRLGQSATTLSGGEAQRVKLA
RELAKRDTGKTLYILDEPTTGLHFEDIRQLLTVLHRLRDHGNTIVVIEHNLDVIKTADWI
IDLGPEGGSGGGQIIAEGTPEKVSKMEVSHTGRFLKPLLERQANPTPTRKSSNSKQGGKE
KASA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatactggtcaggggtgcgcgcacccacaacctcaagcatatcgatgtcgag
ctgccccgtgacaagctgatcgtggtgacgggcctatccggctccggcaagtcctccctg
gccttcgatactctgtatgccgaggggcagaggcgttatgtagagtcactatcgacctat
gcgcgtcagttcctgtcgatgatggaaaagcccgatgttgatcatatcgaggggctgtct
ccagcgatttccatcgagcagaaatccacttcccacaacccacgctccacagtcggcacc
atcaccgagatctacgactacttgcgcctgctgttcgcccgcgccggcaccccacgttgc
ccggagcacggagaggacctcgaggcgcagaccatctcgcagatggtcgaccaggtactg
acactgccggaaggcagcaagctgatgttgatggcgccagtggtcagcggacgcaagggt
gagcacctacagttgctggccgaactacgcgctcagggcttcgtgcgcgcgatgatcgat
ggccaggtgcttgagttggatgacatcaagccgctggacaagaaccgcaagcatgacatc
agcgtggtcgtcgaccgcatcaaggtccgtgaagggctggagcagcgccttgccgagtcc
ttcgagactgcactgggcctggccgatggtactgccatggtgcacttcatggacggtgag
cagccggatatcaccttctcagcacgcttcgcctgcccggtgtgcggctattcgatcccc
gaacttgaaccgcgcatgttctcgttcaacaacccggcgggcgcctgtccaacctgcgac
ggcctgggagtggaacagttcttcgatcccgacaagttgatcagccatccggagttgtcg
ctggccgaaggcgtcatcaagggttgggaccggcgcagtgtctactacttcaaccagctc
aagtcggtggccgagcactaccgttttactctggaaacctcctggcaggacctcgcccgc
cacgagcgcgacgtcatcctccacggcagcggcacggatgaaatcgccttcatctacgtc
aatgatcggggcaagaaggtcactcgtgagcataccttcgaaggcgtgctgcccaatatg
cagcgacgctaccgtgaaaccgaatcgagcatggtgcgtgaagagctatcgcgctacatc
gcggtacagccatgtcagacctgcgaaggggcacgtctgcgcaaggaggctcgccatgtg
ttcgtcgacggcaccaccctgcccgacgtggtacgcctgccgatcggtgaggcacagcag
tacttttccgagctgagtctgccgggccgcaagggtgagatcgcgttgaagatcatcaac
gagatttccgctcgcctcgaatttctcgtcaacgtcggcctcgactacctcaaccttgag
cgcagtgccgagacgctctccggtggcgaagcccaacgtattcgtctcgccagtcagatt
ggtgccgggttggtcggtgtcatgtatatcctcgatgagccgtccatcggccttcaccag
cgcgacaatgaccgtctgctgcagacactggtgcgcctacgcgatctcggtaataccgtg
atcgtcgtggagcacgatgaggacgccattcgcgccgccgaccacgtattggatatcgga
cccggtgcgggcgtgcatggcggacagatcgtcgcccagggcacaccacaacagatcatg
gacaatgagcactcgctcaccggccagtatctgtgcggctctcgcgagatcgccgtacca
ccgtggcggatacccggcaacccggagaagatgctcaaactgaccggcgccaccggcaat
aacctgcaggacgtgacgctcgaactaccgctgggactgctggtatgtgtgaccggtgtt
tccggttcaggcaagtcaacactgatcaacagcaccctgatgccaattgccgctcgcgaa
ctcaaccgcgccacaaccttgaccccctcgccctataccggcatcgaagggctggatcag
ctcgacaaggtcatcgatatcgaccagagcccgatcggtcgaacgccgcgctccaacccg
gcgacctacaccggcatcttcaccccgattcgggaactgtttgccgggactcaggaagct
cgttcacggggctacaagccaggccgcttctccttcaacgtcaagggtggccgctgcgag
gcctgtcagggcgaaggcatgatcaaggtcgagatgcacttcctgccggacatctacgtg
ccttgtgacgtgtgcaagggcaagcgctacaaccgcgagacgctggatatccagtacaag
ggcaagaccatcgacgaagtcctcgggatgacggtcgaggaagcgctggagttcttcagc
ccggtgccggccattgctcgacgcctgcagacactggtcgatgttggcctgacctatatc
cgccttggacagagcgccaccacgctctcaggcggcgaggcgcagcgcgtcaagctagcg
agggagctggccaaacgcgataccggcaagaccctgtatatcctcgatgagccgaccacc
ggcctgcacttcgaggatattcgccagctgctgaccgtgcttcatcgcctgcgtgatcac
ggcaataccatcgtggtcatcgagcataacctcgacgtgatcaagactgccgattggatc
atcgaccttggccccgaaggtggctccggcggtggccagatcattgccgagggcacccct
gagaaggtgtccaaaatggaagtgtcacacacaggacgcttcctgaagccattgctcgaa
cgccaggcgaacccaacaccaaccaggaagagcagcaacagcaagcaaggtggcaaggag
aaggccagcgcctga
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