Hathewaya histolytica: NCTC503_00455
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Entry
NCTC503_00455 CDS
T05971
Symbol
lagD
Name
(GenBank) bacteriocin ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
hhw
Hathewaya histolytica
Pathway
hhw02010
ABC transporters
hhw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hhw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC503_00455 (lagD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC503_00455 (lagD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhw01002
]
NCTC503_00455 (lagD)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhw02000
]
NCTC503_00455 (lagD)
Peptidases and inhibitors [BR:
hhw01002
]
Cysteine peptidases
Family C39
NCTC503_00455 (lagD)
Transporters [BR:
hhw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCTC503_00455 (lagD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
ABC_ATPase
SMC_N
nSTAND3
AAA_22
Peptidase_C70
AAA_16
AAA_29
TsaE
DLIC
SRP54
Zeta_toxin
AAA_5
AAA_24
AAA_7
Motif
Other DBs
NCBI-ProteinID:
VTQ83977
UniProt:
A0A4V6KBU3
LinkDB
All DBs
Position
1:472361..474634
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AA seq
757 aa
AA seq
DB search
MGYKKYLVKQHDMTDCAAACLATVCMYYKKEISITKLRDVLGTDIKGTTLKGLEDGANRL
GFDTRAIRVDKKGFKSKYTLPAIAHVITEEGLSHFVVIHKIKKDKVIILDPAKGVEKKEI
DEFFENFDGILLLMIPNNEFSPGKNKNGGMLYKFISLLLPQKALFIYSIIASVILTTLGI
ASSFFNKILMDEILPYGLKNQLKIFVIGFLILGITQIILSAIRQYMLLYLSQKIDIPLLL
GYFKHVYKLPMQFFTTRKVGDILTRFNDAFTIKNVLTSISLSLIIDVILATVSAVILYIM
NSTLFIVILIITVISAALIYIFKEPYKKINLKQMEAGARLNSHIIESLKGVETIKVLAAE
DKSIEKLEVQYIKNLKIAFKEGVLSNIQGSISSGVSAIGNLIMMYIGATLVIDGKITLGS
LMAFTSLSDYFMEPIGRLISLQLSIQEASISLKRISEIYEVEKEQIEEDKIKLESVDGDI
ELENVTFRYGSRAPVLKDVSIKIPKGKKVALVGESGSGKTTISKLLLKYYNPEEGKIKIS
SYDIEELDIYSLRKSIAYVPQNIELFSGSIRENILLGKERASYEDIKNACENANCHSFIE
KLPGKYDTFLDEAGGGLSGGERQRLALARALIKKSKFLILDEATSNLDFISEARIYDTLF
VKGKDLTMLIIAHRLSTIRNCDLIYVMDSGKVVEVGDHETLLKEKGYYYKLYVSQVGELE
HKNIEESDGNEDSYKMNIENENSMVGKLQEGEEYEYN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgggatataaaaagtatttagttaaacaacatgatatgactgattgtgcagcagcatgc
ttagcaacagtctgcatgtactataaaaaagaaataagtataacgaaattaagagatgta
ttggggacagatattaaaggaacaactttaaaaggattagaggatggagctaatagatta
ggatttgatactagagctattagggttgataaaaaaggtttcaaaagtaaatatacactt
ccagctatagctcatgtaattactgaagagggacttagccattttgtagttatacataag
ataaaaaaagacaaggttattatattggatcctgcaaaaggagtagaaaaaaaagagata
gatgagttttttgaaaatttcgatggaatactccttttaatgattcccaataatgaattt
tcaccaggtaaaaataaaaatggaggtatgttgtataaattcataagtttacttctacct
caaaaagcattatttatttatagtattattgcatctgtaatactgactactttaggaata
gcatcatcttttttcaataaaatactcatggatgaaatactaccctatgggttaaaaaac
caacttaagatatttgttataggttttttaattttaggtattactcaaattatattatca
gcaataaggcaatatatgcttttatatttatctcaaaagatagatataccattgttactt
ggatattttaaacatgtttataagttacctatgcagttttttactactaggaaagttggg
gatatattaacaaggtttaatgatgcttttactattaaaaatgttctaacatctatatct
ttatcattaataatagatgttatattagctacagtttctgcagttatcttgtacataatg
aacagtacgttatttatagttattttaataattacagttataagtgctgccttaatatac
atatttaaagaaccttataaaaagattaatttaaaacaaatggaagctggtgcaaggtta
aatagtcatattatagaaagcttaaagggtgtagaaactataaaagttttagcagcagaa
gataaaagcatagagaagcttgaggttcaatacataaaaaatctaaaaatagcttttaaa
gaaggggtattatcaaatattcaaggatctatttcatcgggagtatctgcaataggaaat
cttattatgatgtatattggtgcaaccttggttatagatggaaaaattacattaggtagc
ctcatggctttcacatcactatctgactattttatggagccaataggaagattaattagt
ctacagcttagcatacaggaagctagtatatcgttaaagagaatttctgagatatatgaa
gttgaaaaggaacaaatagaagaggacaaaataaaattagaaagcgtagatggagatata
gaacttgaaaatgttacttttaggtatggtagtagagcaccagtcttgaaagatgtaagt
ataaaaatccctaaaggcaaaaaggtagctttagttggggaatctggtagcgggaaaaca
actatatctaagttattattgaaatattacaacccagaggagggaaaaataaaaatttct
agttatgatatagaagaattagatatttattcattgagaaaatctatagcttatgtacct
caaaatattgaacttttttctggttcaattagagaaaacatacttctaggtaaggaaagg
gctagctatgaagatataaaaaatgcttgtgaaaatgcaaactgccactcctttatagaa
aaacttccaggaaaatatgatactttcttagatgaggctgggggtgggttatcaggagga
gagaggcaaaggcttgctcttgcaagagcgcttataaaaaaatcaaaatttttaattctt
gatgaagctactagtaacttagattttattagtgaggcaagaatttatgatactttgttt
gttaaaggaaaggacctaacaatgcttataatagcacataggttatctactataagaaat
tgtgaccttatatatgtaatggatagcggaaaggtagtagaggtaggggatcatgaaaca
cttttaaaggaaaaaggttactattataagttatatgtaagccaagtaggagaattagaa
cataagaatattgaagaatcagatggaaatgaagatagttataaaatgaatattgaaaat
gaaaattccatggtgggaaagttacaggagggtgaagaatatgaatacaattga
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