Haliscomenobacter hydrossis: Halhy_3569
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Entry
Halhy_3569 CDS
T01491
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hhy
Haliscomenobacter hydrossis
Pathway
hhy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hhy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Halhy_3569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhy03021
]
Halhy_3569
Transcription machinery [BR:
hhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Halhy_3569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_24
GerE
HTH_5
HTH_10
HTH_40
DUF1413
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
AEE51423
UniProt:
F4KXR2
LinkDB
All DBs
Position
4487112..4487696
Genome browser
AA seq
194 aa
AA seq
DB search
MNRNGYSDAELLNALKADDELAFKELYDRYWHKMYSIALRKLGRKEVAEELAQELFVMLW
QKRATLRIINLNAFLQVSLKNLSIDYIRHHIQEEHYLDSLKQYFPLEIMTTTDMVYFNEL
TEALQKALAELPEKTRQIFMLNRFERLTIREIAVQLNLSEKSIEYHLSRSTTYLRQHLRE
YNAYGLTFLAFLLY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaacgggtattctgatgcagagttactgaacgcgctaaaggctgatgatgaa
ttggctttcaaggaattgtatgaccgatactggcataaaatgtacagcattgccttgcgt
aaattgggacgcaaggaagtagccgaagaattggctcaagagttatttgtgatgctctgg
caaaaacgtgctaccctacgcatcatcaatttgaatgcttttttgcaggtttcgctcaaa
aacctgagtatagattacatccggcaccacattcaggaagaacattatctggactcactc
aaacagtatttcccgcttgaaatcatgaccactacggacatggtctattttaatgaactg
accgaggccctgcaaaaagcgctggccgaattgcccgaaaaaacccggcaaatatttatg
ctcaatcgcttcgagcgcctgaccattcgggaaattgctgttcaactcaacctttctgaa
aagtccattgagtaccatctctcccgctctacgacttatttgcggcagcacctgcgcgag
tacaatgcgtatggacttacctttctcgcattcctcctttattaa
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