Haemophilus influenzae R2846 (nontypeable): R2846_1267
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Entry
R2846_1267 CDS
T01980
Symbol
hrpA
Name
(GenBank) Probable ATP-dependent RNA helicase
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
hie
Haemophilus influenzae R2846 (nontypeable)
Brite
KEGG Orthology (KO) [BR:
hie00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
R2846_1267 (hrpA)
Enzymes [BR:
hie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R2846_1267 (hrpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
T2SSE
ResIII
nSTAND3
AAA_30
HA2_N
NACHT
AAA_25
FtsK_SpoIIIE
Fis1_TPR_N
Motif
Other DBs
NCBI-ProteinID:
ADO96659
LinkDB
All DBs
Position
1326903..1330814
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AA seq
1303 aa
AA seq
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MKNSSVKHTLTPLQQSLFSQLNDIMRVDQRRLSARIHGIGKIKSQEAQQAVAAEIQQQIE
QARLRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMC
LELGFGNLGMIGHTQPRRIAARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMT
DGILLAEIQNDRFLNQYSCLIIDEAHERSLNNDFILGYLKQLLPRRRDLKLIITSATIDV
ERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAESRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF
NSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDKRHIQDGIKLLEELGAFEM
VRTKAGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQ
EKQQASDEKHRRFADKKSDFLAFLNLWNYVQEQQKSLTKNQFRRQCQKDFLNYLRIREWQ
DIYHQIRLTVREMGLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIF
PNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEHLIKKSYSEPRWSKSRGA
VIADEKVTLYGVPIVAARPVNYGAIDPRVSREIFIQSALVEGDWNTKHKFFKKNQQLICE
IEELEHKSRRRDILVDERTLFEFYDQRISTEVVSQKHFDTWWKKAQQKDPELLNFERSFL
INDDAEKVSKLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQI
PGLREKLVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLIYELRRMTGVTV
EAEHWNWEQIPTHLKMTFRVVDENGKKISESMNLDELKFNLKDRVQESISAVADDGIEQS
GLHIWSFADLPQCYEQKQRGFSVKAFPAIVDEKDAVGIKLFETEFEQAVAMQQGLRRLLL
LNVPSPIKYLHEKLPNKAKLGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEVGFE
KLRDFVRENLNEVTVDIAQKVEQILSLNYTLNQRLKGKMDFTMAFALSDIKSQLAGLVYQ
GFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSK
PISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIVNIISQY
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagctcggtaaaacacacattaactcccttacaacaatctcttttttctcaa
ttaaatgacatcatgcgggtggatcaacgtcgcttatccgcccgcattcatggtattgga
aaaattaaaagccaagaggctcaacaagccgttgccgctgaaatccaacagcaaattgaa
caagctagattacgtgtagaacaacggaaaagtgcggtacaaaatccgattgtttttcca
gagagtttgcccgttagccaacgcaaagtcgaaattcaaaaactgatttctgaacatcag
gtcatcgtggtggcaggggaaactggttcaggtaaaaccacccaattgccgaaaatgtgt
ttggaattaggtttcggcaatttaggcatgattggtcatactcaaccacgccgtattgct
gctcgttcggtggcggcgcgtattgcggaagaactggaaacggagcttggcggtttagtt
ggttataaggttcgttttaacgatcaaatcagcgataacacccaaatcaaattgatgact
gacgggattctgctagcagaaattcaaaacgatcgttttctcaatcaatattcttgtttg
attatcgatgaagcccacgaacgtagcctaaataacgattttattctcggttatctgaaa
cagttgttgccacgtcgtcgtgatttaaaacttattatcacttctgcaaccattgatgtg
gaacgcttttctaaacattttaataatgcaccgatcattgaagtctcaggcagaacctat
cctgttgaagtgcgttatcgtcccgtagtggaggaagacgatcaagatcagctacaaggt
attcttaatgcggtggatgaattgcaagcagaaagtcgaggcgatatcttgatctttatg
aatggagagcgtgaaattcgtgatactgccgaagccttgcaaaagcaaaatctaaaacac
acggaaattctaccgctctttgcacgcttgtctgcgcaagaacaaaataaaattttccat
ccaagtggcttaaatcgcattgtattagcgaccaacgtcgcagaaacctcattgaccgtg
ccgggcattaaatatgtgattgacccaggtactgcgcgcatttcccgttatagctatcgc
accaaagtacaacgtttaccgattgaacctatttcacaggcatctgcaaatcagcgtaaa
ggtcgatgtggtcgtgtaagtgaagggatttgtattcgtttatattcggaagaggatttt
aattctcgtccagagtttaccgatcctgaaattctacgcaccaatttagcctccgttatt
ttgcaaatgacggcattgggtttggatgatattgaagcgttcccatttgttgatgcgcca
gataaacgccatattcaagatgggataaaactgttggaagaattgggcgcgtttgaaatg
gttcgcaccaaagcgggtgaaaaacgcctattaactagagttggtcgccaactcgctcaa
cttccagtcgatccgcgccttgccaaaatgatcctaagtgcggtcaattttggctgcgtt
tatgaaatgatgatcatcgtctctgcgttatccattcaagatccgcgcgaacgaccacaa
gaaaaacagcaagcttctgatgaaaaacatcgtcgttttgccgataaaaaatcagatttc
ttggcgttcttgaacttgtggaattacgttcaagaacagcaaaaatcattgacaaaaaac
caattccgccgccaatgccaaaaggatttcttaaattatttacgcattcgagaatggcaa
gatatttatcatcaaattcgtttaaccgtgcgtgaaatgggcttgccgattaattccgaa
aaagcagaatatcagcaaattcacaccgcacttttaagcggcttgctttctcatatcggt
ttaaaagaagcggaaaaacaacaatatcttggcgcacgtaatgcccattttgcaattttc
cctaattctgtacttttcaaaaaacaaccgaaatgggtgatggcggcagagttagtggaa
acctccaaactttgggggcgtatggtggcagaaatcgagccagaatggatcgagccactt
gccgagcatttgataaaaaaatcctattccgaaccgcgttggtcaaaatctcgtggtgcc
gtgattgcagatgaaaaagtcacgctttacggtgtgccgattgtggctgcacgaccagtg
aattacggtgctattgatccaagggtaagccgtgagatctttattcaatctgccttagtg
gaaggggattggaataccaaacataaattcttcaagaaaaatcagcaactaatttgtgaa
attgaggaattagaacacaaaagccgtcgtcgcgatattttggtggatgagcgtactcta
tttgagttttacgatcagcgtattagcacagaagtagtttcccaaaaacattttgatacc
tggtggaaaaaggcgcagcaaaaagatcctgaattgcttaactttgaacgttcattcttg
attaatgatgatgcagaaaaagtgagcaagcttgatttcccgaatttctggcatcaaggt
aatttaaaactcaaactgacgtatcaatttgaaccaggtactgatgcagacggagtgacc
gtacatattccgttgccattgctcaaccaagtggaaatgacgggttttgactggcaaatt
ccaggcttgcgtgaaaaattggtgattgcgttgattaaatctctgccgaaatcttatcga
cgtaacttcgtgccggcacctaattatgctcaagcttttttaagtcgagccgtgccgttg
gaaaagccgttattagatacgctgatttatgaattgcgtcgtatgacgggcgttaccgta
gaagctgaacattggaattgggagcaaattccaactcatttaaaaatgacgttccgtgtg
gtggatgaaaacggtaagaaaatctctgaatccatgaatttggatgagctgaaatttaac
ttaaaagatcgtgttcaggaaagtatttctgctgtggcagatgatggtattgaacaaagc
gggctacatatttggagctttgcagatttaccacaatgttacgagcaaaaacaacgtggt
tttagcgtaaaagcgttcccagccattgtagatgaaaaagatgccgtaggtatcaagctg
tttgaaacagagtttgagcaagcggtggcgatgcaacaaggtttgcgccgattgttgttg
ctcaatgtaccatcaccgattaaatatctgcatgaaaaattgccgaataaagccaaattg
gggctgtattttaccccgtttggtcgcgtattggatttgatagatgactgtatcgcttgt
gccgtggataaactgattgccgattttggcgggtttgtatgggatgaagttggctttgaa
aaattgcgtgattttgttcgagaaaaccttaacgaagtgactgtggatattgcacagaaa
gtggagcaaatcctatccctaaattataccttaaaccaacgtttaaaaggcaaaatggat
ttcacgatggcatttgcattatccgacatcaaatcgcaacttgcaggtttggtgtatcaa
ggttttgtgcaaaagagcggttatgatcgcctaccagatttacaacgttatctgcaagcc
gttgataaacgtattgataagttggctcaagatgtaaaccgtgatcgtgcagcgatgcta
cgcgtggaacaagtacaacaggcttaccaacaattgctggctaaactaccaaaatctaaa
cctatttccgatgaagtagcagaaattcgctatatgatcgaggaattacgcgtaagttta
tttgcgcagcaattaggcacgaaatatcaaatatcggataaaagaatagtaaatattatt
agtcaatattaa
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