Haemophilus influenzae Rd KW20 (serotype d): HI_1365
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Entry
HI_1365 CDS
T00001
Name
(GenBank) DNA topoisomerase I (topA)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hin
Haemophilus influenzae Rd KW20 (serotype d)
Brite
KEGG Orthology (KO) [BR:
hin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hin03032
]
HI_1365
03400 DNA repair and recombination proteins [BR:
hin03400
]
HI_1365
Enzymes [BR:
hin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HI_1365
DNA replication proteins [BR:
hin03032
]
Prokaryotic type
DNA Topoisomerases
HI_1365
DNA repair and recombination proteins [BR:
hin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HI_1365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AAC23012
UniProt:
P43012
LinkDB
All DBs
Position
1450938..1453544
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKPISTKGMDAEE
KAKIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVSELKSLAKKADHIYLATDLDR
EGEAIAWHLREVIGGNDDRFSRVVFNEITKNAIKQAFEKPEQLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEVAVLTNNQNKQAI
RLDVTDYKGKKFDPKNQKEAQSAVDFLNVSDYVVTDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIENHFGAQYLPEKPNF
YSSKENAQEAHEAIRPSDIRALPESLEGMEKDAVRLYDLIWCQFLACQMPPAQYDSSTLT
VTAGDYTLKAKGRILRFDGWTKVLPQIGKNPEDQELPSVTVSEKLALKEVQPTQHFTKPP
ARFTEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESF
GELMNYDFTANMEDTLDKIASGSVNWKTELNQFFKDFSSQLSKAELDELEGGMRPNSLVE
TDIKCPTCGRNMAIRTASTGVFLGCTGYALPPKERCKTTINLIPEAELLNVLDESSETKA
LMDRKRCTKCGTAMDSYVIDAHRKIHICGNNPNCDGYLIEEGSFKIKGYDGPVVECDKCG
ADMHLKLGRFGKYMGCTNCDNTRKILKNGEVAPPKEEPVHFPELKCEKSDAYFVLRDGAS
GVFMSAHNFPKSRETRPVKIAELVQYRERLPEKLAYLADAPQKDPEENEAIVRFSRKEKK
QYVTSEKEGKATKWIVDFTNGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttggtgattgtggagtcgccagcaaaagcaaaaactattaataagtat
ttaggtagccaatatgtcgtgaaatcgagcgtgggacatattcgtgatttgccgacggtt
ggttctagtacaggtgaaaaagctaaaccaatttcaaccaaaggtatggatgccgaagaa
aaagcaaaaattaaggcagaaaaggaacgtaacgccttagttaaacgtatggggattgat
ccttatcacgattggaaagcaaattatcagattttgcctggtaaagaaaaagtggtttcc
gagttaaagtcgcttgctaaaaaagcagatcacatttatctcgcaaccgacttggataga
gaaggggaagcgattgcgtggcatttacgtgaagtgattggtggtaacgatgatcgtttt
agtcgcgtggtgtttaacgaaatcactaaaaatgccattaaacaggcttttgaaaagcct
gaacaattaaatatggatcgtgttaatgctcaacaaactcgtcgttttttagatagagtg
gtgggctttatggtgtcgccattactttggaaaaaagtagctcgcgggctttctgctggt
cgagttcaatcagttgcggttaaattattagtcgaacgcgagcgtgaaattaaagcgttc
cagcctgaagaatattgggaagttgccgtccttacgaataatcaaaataaacaagctata
cgtttagatgttacggattataaaggcaagaaatttgatccaaaaaatcaaaaagaagca
caaagtgcggtagattttctgaatgtttcagattacgttgtcacagatttggaaactaag
ccaacaagttctcgccctcgagcaccatttattacatcaacacttcaacaaacggcaagt
actcgcttgggatttggcgttaagaagacaatgatgttagcccaacgtttatatgaagcg
ggttacattacttatatgcgtacggattcaaccaatttgagtcaagatgcgcttaatatg
gcgcgtagctatattgaaaatcattttggtgcacaatatttaccagaaaaaccaaatttc
tattctagtaaagaaaatgcgcaagaggcacatgaggctattcgtccatcagatattcga
gcattgcctgaatctttagagggaatggaaaaagatgcggtacgcctttatgatttaatt
tggtgtcaattcttagcatgtcaaatgccacctgcacaatatgatagtagcacgctgacc
gttaccgctggcgattataccttgaaagcaaagggcagaattttacgttttgatggttgg
acaaaagtattgccacagataggcaaaaatcctgaagatcaagaattgccttcagttact
gtgtcagaaaaacttgctttaaaagaagtgcaaccaactcaacattttactaaaccacct
gctcgttttactgaagcggctttagtaaaagaattggaaaaacgtggtattggcagacct
tccacttatgcggcaattatttccaccattcaagaacgaggttatgttcgtactgaaaat
cgtcgtttctatgcagaaaagatgggcgaaattgtgactgatcgcctcaatgagtctttt
ggtgaattaatgaattacgatttcaccgcgaatatggaagataccttagataaaattgcc
tctggttcagtaaattggaaaactgaattgaatcaattctttaaggatttttctagccag
ctttctaaagctgaattagatgaacttgaaggtggtatgcgcccgaatagccttgtggaa
acagatattaaatgcccaacctgtggcagaaatatggcaattcgtacggcgagtacgggg
gtgtttttaggatgtacaggttatgcattaccaccaaaagagcggtgtaaaacgacgatt
aatttaattcctgaagcggaattattgaatgttttagatgaatcttcagaaaccaaagca
ttaatggatcgtaaacgttgtacaaaatgtggaacggcaatggacagctatgtaatcgat
gcccatcgtaaaatccatatttgcggtaataatccaaattgtgatggatatttaattgaa
gaaggctcattcaaaattaaaggttatgatggccctgttgttgagtgtgataaatgcggt
gcggatatgcatctaaaacttggtcgttttggcaagtatatgggatgtacaaattgtgat
aacacacgcaaaattttgaaaaatggcgaggtcgcaccaccgaaagaagagccagtacat
ttccctgagttaaaatgcgaaaaatctgatgcatattttgtattacgtgatggtgcgagt
ggtgtatttatgtcagcccataacttccctaaatcacgcgaaacacgcccagttaaaatc
gctgaactagtgcaatatcgcgagcgtttacctgaaaaattagcttatttagccgatgct
ccacaaaaagacccagaagagaatgaagcgattgttcgttttagtcgtaaagagaagaaa
caatatgtgacttctgaaaaagagggaaaagcgacgaaatggattgttgatttcaccaat
ggaaaatgggttgaacgaaagaaataa
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