Haloarcula marismortui: rrnAC1527
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Entry
rrnAC1527 CDS
T00211
Symbol
cdc48d
Name
(GenBank) cell division control protein 48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hma
Haloarcula marismortui
Brite
KEGG Orthology (KO) [BR:
hma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hma03019
]
rrnAC1527 (cdc48d)
03009 Ribosome biogenesis [BR:
hma03009
]
rrnAC1527 (cdc48d)
04131 Membrane trafficking [BR:
hma04131
]
rrnAC1527 (cdc48d)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hma04147
]
rrnAC1527 (cdc48d)
Messenger RNA biogenesis [BR:
hma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
rrnAC1527 (cdc48d)
Ribosome biogenesis [BR:
hma03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
rrnAC1527 (cdc48d)
Membrane trafficking [BR:
hma04131
]
SNARE
SNARE associated proteins
Others
rrnAC1527 (cdc48d)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
rrnAC1527 (cdc48d)
Exosome [BR:
hma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
rrnAC1527 (cdc48d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
AAA_22
TIP49
AAA_2
AAA_33
AAA_14
nSTAND3
AAA_28
RNA_helicase
AAA_18
IstB_IS21
Mg_chelatase
AAA_7
AAA_17
AAA_3
Sigma54_activat
Parvo_NS1
NB-ARC
DUF815
ABC_tran
AAA_11
AAA_24
ATPase
AAA_30
TsaE
PhoH
SLFN-g3_helicase
bpMoxR
NACHT
Vps4_C
IPT
Motif
Other DBs
NCBI-ProteinID:
AAV46447
UniProt:
Q5V205
LinkDB
All DBs
Position
I:complement(1360130..1362355)
Genome browser
AA seq
741 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGSDTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEAEKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETEPEGVCLITEDTEVELREEPISGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDASEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDSVDPALRRPGRFDREIEIGVPDEV
GREEILQIHTRGMPLSDDVNLAKLATDTHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRDDFKGALNEVSPSAMREVLVELPKMSWDNVGGLSGPKEQVQEAVEW
PMNSPEKFERMGVTPPSGVLLYGPPGTGKTLMAKAVANETDANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVAPTIIFFDELDSLAPGRGGEMGSNVSERVVNQLLTELDGLEEMEDV
MVIGATNRPDMIDPALIRSGRFDRLVMIGEPDIEGREQILKIHTDDTPLSPDVSLRELAE
VSDGFVGSDLESIAREAAIEALREDDNAEEVEMRHFRQAMDSVRPTITDDIREYYEQMEE
EFRGGSSPQRQAGTGGRIGFQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagttcaattggaagtggcgaaggcgtacccgaacgactcgggacgcggtatc
gccagactcgaccccgatacgttgttgcatctcaagctctcccccggagacatcatcgag
atagaggggagcgacacgaccgcggccaaggtgtggcgggccgaccggcaggactggaac
actgacactgttcgcatcgacggcttcacgcgccagaacgctgacgtgggtattggtgag
cgcgtcacaatccggaaggccgaggccgagaaggccgacaagctcgtcctcgcgccgccc
gaggaagcgtcggtccagttcggctccgacgccgctggcatggttaagcggcagatattg
aaacggccggtcgtcgagcgcgacatcgtcccggtgatgtcctcgacgaaccacccgttc
atgcgctcgcccggacaggccatcccgctcatcgccgtcgagaccgagcccgagggcgtc
tgtctcatcaccgaagacaccgaggtggaactccgcgaggaaccgatctccggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcgggctgcaaaacgagatccagcgg
gtgcgagagatggtcgagttgccgatgaaacacccccagatcttcaagaagctcggcatc
gagccgccacagggggttctgctccacggcccgcccggcaccgggaagacgctgcttgcg
aaggctgtcgccaacgagacctccgctagcttcttctctattgccggccccgagatcatc
tcgaagtactacggcgagtccgaacagcagttacgcgagatattcgaggacgcaagcgag
gaatcgccctcgatcatcttcatcgacgagctggactccatcgcgcccaagcgcgaggac
gtaaccggcgaggtcgagcgccgtgtcgtcgcccagctgctgacgatgatggacggcctc
gaatcgcgagggcaggtcatcgtcatcgccgcgacgaaccgcgtcgacagcgtcgacccc
gcgctccgtcgcccgggccgcttcgaccgcgagatcgagatcggcgtgccggacgaggtc
ggtcgcgaggaaatcctccagatccacacccgcggcatgccgctgtccgacgacgtaaat
ctcgccaagttggcgactgacacgcacggcttcgtcggagccgacatcgagagtctcacg
aaggaggccgcgatgaaggcgctccggcgctaccttcccgagatcgatctggacgaggag
gacatcccgccgagcctcatcgaccggatgataatcaagcgcgacgacttcaaaggggcg
ctcaacgaggtgagtccatcggcgatgcgggaggtgctggtcgaactcccgaagatgtcc
tgggacaacgttggcgggctcagtgggcctaaagagcaggttcaggaggccgtcgagtgg
ccgatgaactccccggagaagttcgagcgcatgggcgtgacaccgccgtcgggggtgttg
ctgtacggcccacccggcaccgggaagacgctcatggcgaaagccgtcgccaacgagacg
gacgcaaacttcatctcggtccgtggcccgcaactgctctcgaagtgggtcggcgagagc
gagaaggccatccgccagacgttccggaaggcccgccaggtcgccccgaccatcatcttc
ttcgacgaactcgactcgttggcaccgggtcggggcggcgagatggggtcgaacgtctcc
gagcgcgtcgtcaatcagctcctgaccgaacttgacgggcttgaagagatggaggacgtg
atggtcattggcgcgaccaaccggccggacatgatcgacccggcgctaatccgttcgggc
cggttcgaccggctcgtgatgatcggcgagcccgacatcgagggccgtgagcagatcctg
aagatccacacggacgacacgccgctgtcgcccgacgtgagcctgcgcgaactggccgaa
gtcagcgatgggttcgtcggctcggacctcgaatctatcgcccgggaggctgccatcgag
gcactccgtgaggacgacaacgcggaggaagtcgagatgcgtcacttccggcaggcgatg
gacagcgtgcgcccgacgattaccgacgacatccgcgagtactacgagcagatggaagag
gagttcagaggcggttccagcccgcagcgccaggccggaaccggcggccggatcggcttc
cagtaa
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