Hydrogenovibrio marinus: HVMH_1400
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Entry
HVMH_1400 CDS
T06677
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hmar
Hydrogenovibrio marinus
Brite
KEGG Orthology (KO) [BR:
hmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hmar03400
]
HVMH_1400 (radA)
DNA repair and recombination proteins [BR:
hmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HVMH_1400 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
ChlI
Lon_C
DnaB_C
AAA_16
SLFN-g3_helicase
Rad51
AAA
GvpD_P-loop
AAA_22
AAA_24
NTPase_1
nSTAND3
AAA_14
AAA_5
ABC_tran
TIP49
GvpD_bR2
KdpD
MCM
Prok-RING_2
Elong_Iki1
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BBN59806
LinkDB
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Position
complement(1488530..1489894)
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AA seq
454 aa
AA seq
DB search
MAKKSKSAYVCTECGAEHSQWQGQCVACGEWNTLKEIKLGAQKVSSKRQLGYAGEQSSDI
KVINDVSLDEVPRFSSSIEELDRVLGGGVVSGSVVLIGGDPGVGKSSLLLQVSCHLSENM
SVLYVTGEESLQQVAMRAKRMGLPDQSLKLYSETDVELIAEAASNEKPKVMIVDSIQTLQ
HSEVSSAAGGVSQVRETAAYLTRFAKQNNIMIFLVGHVTKSGEVAGPRVLEHIVDTVLFL
EGQSDSRFRTLRAIKNRFGAVNELGVFAMTEKGMKQIKNPSAIFLSRGEVVSPGSVVMVV
WEGSRPLLIEIQVLVDDSPYGSPKRVTVGFDNNRMSMLLAVLHRHAGIQASDQDVYVNVV
GGVKVNETSADLAVLSAVVSSLRNKALPEDLVVFGEVGLSGEIRPVSSGQERIFEAAKHG
FKKAIVPAANAPKEPVPGMKIYPVSRLSEALELL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaatcaaaatcagcttacgtctgtaccgagtgtggtgccgagcattcgcaa
tggcaagggcagtgtgtcgcttgtggtgagtggaatacgcttaaggaaataaaactaggc
gcacaaaaagtaagtagtaagcgtcagttgggttatgctggggaacaaagttctgacatc
aaagtcataaacgatgtcagtctggatgaagttccgcgcttttcctcttctattgaagag
ttggatcgtgttctgggcggaggagtagtctccggttctgttgttttgattggtggagat
ccgggcgtaggtaaatcttctttgttattgcaggtgtcctgtcacctaagcgaaaacatg
tcagtactctacgtgacgggggaagagtcgcttcaacaagtggccatgcgagctaagcgc
atgggcttgccagaccagagtttaaaactctattcagaaaccgatgtagagttaatagct
gaggcagccagtaacgaaaagccgaaagtgatgattgttgactcgatccaaactctacag
cattcagaagtttccagtgccgcaggtggtgtttctcaggttagagaaacggcagcttat
ctcacacgctttgccaagcaaaacaacattatgattttcttagttgggcatgtcaccaag
tcgggtgaagttgctggaccaagagtgttagaacatattgtcgacacggtattgtttttg
gagggacagtcagacagtcgcttcagaacgttaagggcgattaagaaccgtttcggagca
gttaatgagctaggtgtgtttgccatgaccgaaaaaggcatgaagcaaatcaagaatcca
tcagcgatctttttatcgaggggcgaggttgtgtctcccggttccgttgttatggttgtt
tgggaaggatctcgtcctttgctcattgaaatacaggtattggtcgatgattccccttat
ggctcaccaaaacgggtcacggttggttttgataataaccgtatgtcgatgttgctagcg
gtattgcataggcatgcagggattcaagcatcggatcaggatgtgtatgtcaatgtggtt
ggcggagtaaaggttaatgaaaccagtgccgacttagctgtgttgtctgctgtggtttcg
agtctgcgcaataaagcactaccggaagatttggtggtgtttggggaggtggggctttca
ggagaaatccgcccagtatcaagtggacaggaacgtatttttgaggcagccaagcatgga
ttcaaaaaagcgatagtacccgccgcaaatgcgcccaaagaacctgttcctggaatgaaa
atatatccggtgagccgattatcagaggcgttagagctgctttaa
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