KEGG   Hyphomicrobium sp. MC1: HYPMC_2997
Entry
HYPMC_2997        CDS       T01557                                 
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase)
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
hmc  Hyphomicrobium sp. MC1
Brite
KEGG Orthology (KO) [BR:hmc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hmc03009]
    HYPMC_2997 (rluD)
Enzymes [BR:hmc01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     HYPMC_2997 (rluD)
Ribosome biogenesis [BR:hmc03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HYPMC_2997 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: CCB66214
UniProt: F8J9Z4
LinkDB
Position
complement(2863888..2864973)
AA seq 361 aa
MGHLSGFLSGNHVSIDEKTTSHIDVVAGPEDAGQRVDRWLATKIEGISRARVQALIRDGH
VSAGDTIRELRTPVKPGLTYTVSIPPAEDSGVKGEEIALHVVYEDDNVIVIDKPAGLVVH
PSAGHDAGTLVNALIAHCGDSLSGIGGVKRPGIVHRLDKDTSGLLVVAKSDAAHQGLAEQ
FKSHGRDGRLHRSYLAFVWGRLPKPAGSIDARLARSRTNRLKIAVTRGEEGREAKTHYEV
LDVFPGETPSGDISLLRLVLETGRTHQIRVHLAHIGHPVVGDPTYGAGFKTRLASVRANA
KDHATALMRQALHAERLQFEHPITGKKLNFYSKLPLDLERLGEALRPMPSVPTDKRRRRR
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgggtcatctctcaggttttctttctggtaatcacgtgtcgatcgacgaaaaaacaaca
agccacatcgacgtcgtcgcggggcccgaagatgccggccagcgtgtcgatcgatggctt
gcaacgaagatcgaaggcatcagccgcgctcgcgtccaagcgctcattcgcgatggtcac
gtcagcgcaggcgatacgatacgagagctgcgcacgccggtcaaaccgggcctgacatac
acggttagcatcccgcccgccgaagattccggcgtgaagggcgaagagattgcgctccat
gttgtgtacgaggacgacaacgtcatcgtaatcgacaagccggcagggctcgtcgtgcat
ccgtcagccggacatgacgcaggaactctcgtcaacgccttgatcgctcactgcggcgac
agcctctcaggtattggcggcgtcaaacgaccgggcatcgtgcatcgcctcgacaaagat
acctccggacttctggtcgtcgcgaagtcggatgctgcgcatcaagggctcgcggagcaa
ttcaaaagccatggccgcgacgggcggctgcatcgtagctatctggcatttgtttggggc
agacttcccaaacccgccggcagcattgatgcgcggttagcgcgcagccgcaccaatcgc
ctcaaaatcgccgtcacacgcggcgaagaggggcgcgaagctaaaacccattacgaggtt
ctcgacgtctttccaggcgaaacgccgtccggcgatatatcgctgcttcggctcgttctc
gaaaccgggcgtacacatcagatacgcgtgcatctcgcgcatatcggccatccagtcgtg
ggtgatcccacgtatggcgcaggctttaagacgagacttgcgtcggttcgtgcgaatgcg
aaagaccatgctactgcgttgatgcgacaagcgctgcatgctgagcgacttcagttcgag
catccgattaccggcaaaaagctgaatttttacagcaaattgccattggacctcgaacgt
cttggagaggccttgcggcctatgccatcagtgccgacggataaacgccgtcggcggcgt
tcgtaa

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