KEGG   Hydra vulgaris (swiftwater hydra): 100214296
Entry
100214296         CDS       T01080                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
hmg  Hydra vulgaris (swiftwater hydra)
Pathway
hmg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hmg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100214296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hmg03021]
    100214296
   03019 Messenger RNA biogenesis [BR:hmg03019]
    100214296
Enzymes [BR:hmg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     100214296
Transcription machinery [BR:hmg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100214296
Messenger RNA biogenesis [BR:hmg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100214296
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 100214296
NCBI-ProteinID: XP_002155087
UniProt: T2M5H2
LinkDB
Position
12:complement(24062661..24074536)
AA seq 202 aa
MVLEKTMKRSKDLKIAVTCSSNQNRSMEAHGVLSKRGFNVRSYGSGSYVKLPGPTADKPN
IYHFNTPYDQMYQDLARKDPILYKQNGILHMLDRNRRIKRSPERFQDDKSSEFDIIITAE
EKVYDQVLEEFNRREPQSYRPVHIINIEIADNHEEATLGAFQICELCEKLEKPDDLDDDI
AEILEECERKFKRNILHTVAFY
NT seq 609 nt   +upstreamnt  +downstreamnt
atggtgcttgaaaaaacaatgaagagatcaaaagacttgaaaattgcggtgacgtgtagt
agtaaccaaaaccgaagtatggaagctcacggtgttttgagcaaacgaggttttaatgta
cgttcttatggttctggatcatatgtgaagttacctggacctactgctgataaaccaaac
atatatcattttaatacaccttatgatcaaatgtatcaagatcttgctcgtaaagatcct
atactgtataagcaaaatggcattcttcatatgttggatcgcaacagaagaataaaaaga
tctcccgaacgcttccaggatgataaaagttcggagtttgatattataattactgctgaa
gagaaagtttacgatcaggttctggaagagttcaataggcgagagcctcaatcatacaga
cctgtacatataataaatattgaaatagccgataatcatgaagaagcaactttaggcgca
tttcaaatttgtgagctttgtgaaaagctcgaaaaaccagacgacttggatgatgacatt
gcagaaatattggaagaatgcgaacgaaaatttaagcggaacattttacacactgttgcg
ttctactag

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