Hydrocarboniclastica marina: soil367_03235
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Entry
soil367_03235 CDS
T06192
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hmi
Hydrocarboniclastica marina
Pathway
hmi00730
Thiamine metabolism
hmi01100
Metabolic pathways
hmi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hmi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
soil367_03235
Enzymes [BR:
hmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
soil367_03235
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QCF25030
UniProt:
A0A4V1D8F7
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Position
698780..700657
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AA seq
625 aa
AA seq
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MTTLPTYLSDAAAVDDASIQPLPNSEKIYVTGSRPDVRVPMRAIRQSRTATELGGEENPP
VMVYDTSGPYSDPSARVDLRKGLPPLRKTWIEERGDTEQLAGFSSDYSRRRLSDPALDPL
RFGHFNAPRKARAGSNVSQMHYARRGIITPEMEFIAIRENLKLQEAKAQGLLERQHPGES
FGASIPAEITPEFVRDEVARGRAIIPANINHPEIEPMIIGRNFLVKINGNIGNSAVTSSI
EEEVAKLTWGTRWGADTIMDLSTGKNIHETREWLIRNSPVPIGTVPIYQALEKVGGVAED
LSWEIFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTASRVTGIVSRGGSIMAKWCLAHHQE
SFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHDVQ
VMIEGPGHVPMHLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYG
CAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDDAMSKARFEFRW
EDQFNLGLDPDTARAYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYARDHGLETQ
EAVSEGMAAKAGEFRQTGSELYHKV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgactacattaccgacctacttaagcgacgctgctgcggtcgacgatgcgtccatacag
cctttgcccaattctgagaaaatctatgtaacgggctcccggcccgatgtccgggtaccc
atgcgtgcaatccgtcaatcgcgcacggcgaccgagctgggtggcgaagagaatccgcca
gtgatggtctatgacacgtctggtccatactctgatccaagtgcccgcgtcgacctgcgc
aaaggtctgcccccgctacgtaaaacctggattgaagaacggggcgacacggaacagctg
gcggggttcagttccgactacagccggaggcggctgagcgatcccgcgcttgaccctctg
cgcttcggccatttcaacgccccacgcaaggcgcgcgcgggcagtaatgtcagtcagatg
cactacgcccgtcgcggcatcatcacgccagagatggaatttattgcgatcagggagaac
ctcaagctgcaggaggcaaaggctcagggattgctggagcgccagcatccgggagagtcc
ttcggggcgagcattcccgctgagattacgccagagttcgtgcgcgatgaggtagcgagg
ggccgtgccatcatacccgccaatatcaatcaccctgaaatagagcctatgatcatcggc
cggaattttctggtgaaaatcaacggaaatatcgggaactctgccgtcacttcatccatc
gaagaggaagtcgcaaagctcacgtggggcacccgctggggggctgacacgatcatggat
ctgtcgaccggcaagaatatccatgagacccgagagtggctgattcgtaactcacccgtg
cccattggtacggtgccgatctaccaggcgctcgaaaaggtcggcggcgtggctgaagat
ctttcctgggaaattttccgcgatacgctgatagagcaggccgagcagggggtggattac
tttacgatccacgctggcgttcgtctggcctatgtaccgatgacggcgtcacgcgttacc
ggtatcgtctcccggggcgggagcatcatggccaaatggtgtctcgcacatcatcaggag
agcttcctttacacccatttcgaagacatctgcgaaataatgaaggcttacgatgtttcg
ttcagcctcggcgatggcctgaggcccgggtctatcgcggatgcaaacgatgcagcgcag
ttcggcgaactcgaaaccctgggtgagctcacgaagatcgcctggaagcatgacgtacag
gtgatgattgaaggcccgggccacgtgcccatgcacctcatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaggcgcctttctatacgctcgggcccctgaccacggatatc
gcgccgggttacgatcacattacctcgggcattggcgccgccatgatcggctggtatggt
tgcgccatgctctgctacgtcacgcccaaagagcatttgggcctgcctaacaaagacgat
gtaaaaacgggcatcatcacctataaaatcgctgctcatgcggcggatctggccaaaggg
cacccgggcgcccagattcgtgatgatgccatgtccaaggcgcgtttcgagtttcgctgg
gaagaccagttcaacctggggctcgaccccgataccgcgagggcctatcacgacgagacc
ttgcccaaggactctgccaaagtggcccacttctgctccatgtgtggccccaagttctgc
tccatgaagataacccaggaggtccgggagtacgcgcgtgatcacgggctggaaacacag
gaggcggtgagcgagggcatggccgccaaggcaggcgagttccgccagactggcagtgaa
ctttaccataaggtatag
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