Vreelandella neptunia: SR894_03070
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Entry
SR894_03070 CDS
T09634
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hnp
Vreelandella neptunia
Pathway
hnp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SR894_03070 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hnp03400
]
SR894_03070 (mutS)
DNA repair and recombination proteins [BR:
hnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SR894_03070 (mutS)
BRITE hierarchy
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WQH13532
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All DBs
Position
complement(644959..647520)
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AA seq
853 aa
AA seq
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MSQAIPPNTPMITQYLKIKREHPEVLLFYRMGDFYELFFDDAKRAAALLDITLTQRGQSG
GKPIPMAGVPYHSAEGYLARLVAGGESVAICEQIGDPATSKGPVERQVVRIVTPGTLHDE
ALLDARRDNVLVSVSPGKESWGLAWLELSSGRFNVLEVDSEAEMLAELTRLSPAELLVPE
SLTLPDAWSQKRSLRRQGEWLFDLESATRSLCDQFEVQDLRGFGCAHLTTALIAAGVLID
YARDTQRSRLPHVTAISVENRDDAVVIDAASRRNLEIDINLGGSSDNTLASVLDTCTTAM
GSRLLKRWLNRPLRQREIVQARHAGVALLSLDAAYMPLRETLSAVGDVERILARVALYSA
RPRDLARLRDALVTLPELEQQLSEVESGSALDNLRPHIRPYPEMADMLSRALVENPPVVI
RDGGVIADGFDAELDEHRGMAENAGDYLIQLEIRERERTGLANLKVGYNRVHGYFIELPR
SQAQQAPADYIRRQTLKNAERFIIPELKEFEDKALSAKSRALTREKWLYDQLLGDLNNSL
HALQSTSQALAELDVLCAFAERAEALNWVRPTLSESTGIQIDAGRHPVVEQVSETPFVPN
DVTLNPDQHMLIITGPNMGGKSTYMRQTALIALLAHCGSFVPADAAEIGPLDRIFTRIGS
SDDLAGGRSTFMVEMTETANILHNATQQSLILMDEIGRGTSTFDGLSLAWASAEHLAKGR
ALTLFATHYFEMTALPEHMEGVANIHLTATEHGDSIVFMHRIETGPASQSYGLQVAQLAG
VPNHVIKRAREKLISLEQRDVDNTAQAPRTAPQQNDLFAAAPHPVVEALENVDMDDLTPR
EALSLLYQWRDLI
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggccattccccctaacacgcccatgatcacgcaatatttaaagatcaagcgc
gagcaccccgaggtactgctgttctaccgcatgggggatttttacgaactgtttttcgac
gacgccaagcgcgccgccgcgctgctggatattaccctcacccagcgcgggcagtctggc
ggcaagccgatcccgatggcgggcgtaccctaccacagtgctgagggctatctagcgcgc
ttggtcgccggcggcgagtcggtggctatttgtgagcaaattggcgaccctgctaccagc
aaagggcctgttgagcgccaggtggtgcgtattgtcactcccggtacgctccacgatgaa
gcgctgctcgatgcgcgccgcgacaacgtactggtatccgtttcgcctggaaaagagagc
tggggccttgcctggctggagctttccagcggccgcttcaacgtactggaagtagacagc
gaagccgaaatgctcgccgagctgacgcgcctctccccggccgagctgctggtgcccgaa
agcctaacgctacccgatgcctggtcacaaaagcgcagcctgcgccgccagggcgagtgg
ctgtttgatttggaaagcgccacccgcagcctgtgtgatcagtttgaagtacaggattta
cgcggctttggctgtgcacacttaaccaccgcgctgattgctgccggggtattaatcgat
tacgcccgtgacactcagcgctcgcgcctgccccacgtaaccgcgatcagcgttgaaaac
cgcgacgacgcagtggtgatcgacgctgccagccgccgcaatctggaaattgatatcaac
ctgggcggcagtagcgacaacaccctggccagcgtgctggacacctgtaccacagccatg
ggttcgcggctgctcaaacgctggcttaaccgcccgctgcgtcaacgcgagattgtccag
gcccgtcatgcgggggtagcgctgctaagtctggacgctgcctatatgccgctgcgcgag
acgttgagcgcagtgggcgacgtggagcgcattttggcccgggtggcgctatatagtgcc
cgtccacgcgatttggcgcggctgcgggatgcactggtaacactcccggaactggagcag
cagcttagcgaggttgagagcggcagcgcgctggataacctgcgcccgcatattcgcccc
tacccagaaatggccgatatgctcagccgcgcgctggtagaaaatccgccggtggtgatc
cgcgatggtggcgtaattgccgacggctttgatgccgagctggatgagcatcgcggcatg
gcagagaacgccggcgactacctgattcagctagagattcgcgagcgtgagcgcacgggg
ctagccaatctcaaagtgggctacaaccgggtgcacggctacttcattgaactaccgcgt
tcacaagcccagcaggcgcctgccgactatattcgacgccaaacgctgaaaaatgccgaa
cggtttattattcctgagcttaaagagtttgaggataaggcgctatcggccaaatctcgt
gcgctcactcgcgaaaaatggctttacgaccaactgctgggcgaccttaacaacagcctt
cacgcgctacaaagcacctctcaagcgctagccgagctggacgtactgtgcgcctttgcc
gaacgcgccgaggcgttgaactgggtacgcccaacgctaagtgaatccaccggcattcaa
attgatgcggggcgccacccggtagtcgagcaggtcagcgagacgccctttgtacccaac
gacgtgacgctcaaccctgaccagcatatgttgattattaccggccccaatatgggcggt
aaatcgacctatatgcgccagacggcgctcatcgccctactggcccattgcggtagcttt
gtgcccgccgacgccgccgagatcggcccgctggatcgaatattcacccgcattggctca
tcggatgacttggcgggcggacgctctacctttatggtcgagatgaccgaaacggctaat
attctccataatgccacccagcaaagcttgatcctgatggatgagattggccgcggcacc
agcacctttgacggcttgtcgctggcttgggcaagcgctgaacatttggccaaagggcgt
gcgctaacgctgtttgcgacccactactttgaaatgacggcgctgcctgagcatatggaa
ggggtggccaatatccacctaacggcgaccgagcatggcgacagcattgtgtttatgcac
cgcatcgaaacaggcccggccagccagagctatggtttgcaggtggcgcaattagcgggt
gtacccaaccatgtgattaagcgtgcccgcgagaaactgataagtttggagcagcgcgat
gtggataatacggcgcaggcaccgagaaccgcaccgcagcaaaacgatctgttcgccgct
gcaccacacccggtggtcgaggcgttggaaaacgtcgatatggatgacttaacgccgcgg
gaagcgctatcgctgttgtatcagtggcgagacctgatctaa
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