Vreelandella neptunia: SR894_15155
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Entry
SR894_15155 CDS
T09634
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hnp
Vreelandella neptunia
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hnp03016
]
SR894_15155
Enzymes [BR:
hnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SR894_15155
Transfer RNA biogenesis [BR:
hnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SR894_15155
Prokaryotic type
SR894_15155
BRITE hierarchy
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WQH11490
LinkDB
All DBs
Position
complement(3253111..3254145)
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AA seq
344 aa
AA seq
DB search
MINMPEWQRCLDAQFDPPKPGQYRAQPEDFWVDEQLDFTPEAHGEHLWLRVEKRNQTTLD
VVKTLSRLCSVTPRDIGYSGMKDRIAVTRQWLSVHLPGRDAPPELEHSLNALGITVVEQA
RHPRKLKRGVHRTNRFVLRLSGEAIESEDFISRWETLCQHGVPNYFGPQRFGPEGRNLQR
AEALLNRGWRKRDDRQGMMLSTARSFLFNELLSARIVDGTWSQPLAGDTLMLDGTQSVFR
IDASDPTLQARAAELDVHPTGVLWGVGEADQGDAADYEARLLEYYPGLCNGLEHSGVKQA
RRALRMRLLEPQLAWEPGAARLSFSLPRGSFATAVLGELMLTNG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatgccggagtggcagcgctgtctagacgcacagtttgacccgcctaaaccg
ggccagtaccgtgcccagccggaagatttttgggtcgatgagcagcttgattttacccct
gaagcacacggggaacatctgtggctgcgagttgaaaagcgtaatcaaaccacgttagat
gtcgtcaagacattaagtcggctttgtagcgtaacgccccgtgatattggttactccggc
atgaaagaccgcattgccgtcacacgccagtggctgagcgtgcatctgcccggccgtgac
gcgccccctgaacttgagcattcgcttaatgcgctggggatcactgtcgtagaacaggcg
cgccacccacgtaagttgaagcgaggcgtgcaccgcacaaaccgttttgtgttgcgcctg
agcggtgaggccattgaaagtgaagactttattagccgctgggaaacgctttgtcagcat
ggcgtgcctaactattttggccctcagcgctttgggcctgaagggcgcaatcttcagcgt
gccgaagcattacttaaccgaggttggcgcaaacgcgatgatcgccagggtatgatgctc
tccacggcgcgcagttttttgtttaacgaactgctcagcgcacgcattgtggatggcacc
tggtcgcagccgctggcgggcgatacgttgatgctggacggcacgcaaagcgtgtttcgt
atcgatgcctccgatccgacgcttcaggcccgcgccgctgaactggatgtgcatcctact
ggggttctttggggcgttggtgaagcagaccagggcgacgccgctgactatgaagctcgt
ctactggagtactaccctggcctgtgcaatggcttagagcacagcggagtaaagcaggcg
cgccgggcacttcgtatgcgactgttggaaccccagcttgcttgggagcctggcgccgcc
cgactttcgttttcactgcctcggggtagctttgccactgccgtgctgggtgagctgatg
ttaacgaacggatag
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