Hoeflea sp. IMCC20628: IMCC20628_00469
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Entry
IMCC20628_00469 CDS
T03926
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hoe
Hoeflea sp. IMCC20628
Brite
KEGG Orthology (KO) [BR:
hoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hoe03021
]
IMCC20628_00469
Transcription machinery [BR:
hoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC20628_00469
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GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AKH99194
UniProt:
A0A0F7PI34
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Position
complement(497836..498738)
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AA seq
300 aa
AA seq
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MAQGSLPSISAGENGLNRYLSEIRKFPMLEPQEEYMLAKRFLEHEDTKAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRKVKSKIQAVEDGDLRPHQVAEIATKLNVSEAEVISMNRRL
AGDASLNAPIKAGEGESGQWQDWLVDDSESQEDMLVEQDQLETRRGMLQSALDVLNERER
RIFEARRLRDDPITLEDLSTEFSISRERVRQIEVRAFEKVQDSVQKTAAARDKALVTIAD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaggaagtttgccgtccatttctgccggtgagaacggattaaaccgttatctc
tcggaaattcgcaagttcccgatgctggaaccgcaggaagaatacatgctggccaagcgt
ttcctcgagcatgaggacaccaaggcagcccacaagctcgtcaccagccatctgcggctg
gtcgccaagatcgccatgggctatcgcggttacggcctgccgatcggcgaagtgatctcc
gaaggcaatgtcggcctcatgcaggcggtcaagaaattcgatccagaacggggttttcgt
ctcgccacctacgccatgtggtggatcaaggcatcaattcaggaatatatcctgaggtcc
tggtcgctggtcaaaatgggaaccaccgccaaccagaagcggttgtttttcaacctgcgc
aaggtcaagagcaagattcaggctgtcgaggatggcgatcttcgcccgcatcaggttgcc
gaaatcgccaccaagctcaacgtctccgaagcggaagtcatttcgatgaaccgtcgcctg
gctggtgacgcctcgctcaacgcgccgatcaaggccggcgaaggcgaatccggtcagtgg
caggattggctggtcgatgattccgagagccaggaagacatgctggtcgaacaggatcag
cttgaaacccggcgcggcatgctgcagagcgcgcttgatgttctcaacgaacgtgaacgg
cgaattttcgaggcgcggcgtctgcgtgacgacccgattacgctggaagatctgtcaacg
gagttttccatcagccgcgagcgagtgcgccagatcgaggtccgcgcctttgaaaaggtt
caggactcggtgcaaaaaaccgccgcagcccgcgacaaggccctggtcacgatcgccgac
tga
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