Haliangium ochraceum: Hoch_5909
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Entry
Hoch_5909 CDS
T01103
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hoh
Haliangium ochraceum
Pathway
hoh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Hoch_5909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hoh03400
]
Hoch_5909
Enzymes [BR:
hoh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Hoch_5909
DNA repair and recombination proteins [BR:
hoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Hoch_5909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
ACY18384
UniProt:
D0LIM8
LinkDB
All DBs
Position
8097881..8098186
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AA seq
101 aa
AA seq
DB search
MSDSNPSLTTEDIDALGFDHVLRRLRGVVNQLETGQLSLEESLRVYEEGVALARRGHQVL
DGAESRVELLIQDGAREGDAATVPFDEPVEQSERDDDDEGR
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccaatccctcgctcactaccgaggacatcgacgctcttggtttcgaccac
gttttgcgtcgcctgcgcggcgtcgtgaaccaactcgagacgggacaactcagcctggag
gaatcccttcgggtctatgaagaaggcgtcgcgctcgcgcggcgtggccaccaggtcctc
gacggcgccgagagccgggtcgagttgctaatacaggacggtgcgcgcgagggcgacgct
gcgacggtgcctttcgacgaacccgttgagcaatcggagcgcgacgatgacgacgaaggg
cgttga
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