Hafnia paralvei: AL518_08325
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Entry
AL518_08325 CDS
T05667
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpar03021
]
AL518_08325
Transcription machinery [BR:
hpar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AL518_08325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
COG2
Flavi_DEAD
Helicase_RecD
Tab2-like_N
Motif
Other DBs
NCBI-ProteinID:
AMH18018
UniProt:
A0A2A2MD90
LinkDB
All DBs
Position
complement(1869643..1872549)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPATGENRLYSRNDSPITRVMFNPGDT
ITSHDGWQLKIDEVKEENGLLIYIGTRLDTEEANVVMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERILIVVPETLQHQWLVEMLRRFNLRFSLFDDARYSEAML
DATNPFETEQMVICSLDFVRRNRQRLEQMADASWDLLVVDEAHHLAWSENAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQESHFARLRLLDPNRFHDYQEFVSEQQKYRPVADAVTLLL
NDGHLTNEELNMLSEMIAEQDIEPLLKAANAGGTGSVDARNELVKMLMDRHGTSRVLFRN
TRQGVKGFPQRELHQITLPLPSQYQTAIKVSGIMGSKKTVEARANDMLYPERIYQEFEGE
NATWWNFDPRVEWLMNFLTSHRDEKVLVICAQAASAVNLEQVLREREAIRAAVFHEGMTI
IERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFAHHLVMFDLPFNPDLLEQRIGRLDRI
GQNHDIKIFVPCLENTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSSYQTLLGYLAAPSQL
EGFDDFIKACRTQHDALKAQLEQGRDRLLEMHSNGGDAAQELAEAIADQDNDVGLVNFAL
NLFDIVGINQDDQSDNMIILTPSEHMLVPDFPGLPQDGCTVTFDREQALSREDAQFISWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLLEAIYVVEAQAPKHLQLTRFLPPTP
VRMLLDAKGTNLAAQVEFESFNRQLNSINRHTSSKLVNAVQPNVHAMLQAGEALIGEQAT
ALINEAKREADEKLSAELARLESLKAVNPNIRDDELETLEFNRRQVLENLDQAGWRLDAI
RLIVVSHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaccttaggtcaacgctggatcagcgatacggaaagcgaattaggattagga
actgtggtcgcattggatgcgcgcatggtgacattgcttttccctgcgaccggtgaaaac
cgcctttactcacgtaatgactccccaattactcgcgttatgtttaacccgggtgacact
atcaccagccatgacggttggcagttgaagatagatgaagtcaaagaggaaaatggtctg
ctgatctatatcggcacccgattggatactgaagaagctaacgtcgtgatgcgcgaagta
ttactcgatagcaagttgaccttcagcaaacctcaagaccgcctgtttgccggacaaatc
gaccgtatggatcgctttgctctgcgttttcgtgcgcgtaaatatcaaagcgagcagttc
cgcctgccgtggagcggtctgcgcggcatgcgcgccagcctgatccctcatcagttgcac
attgcgtatgaagtcggccagcgtcacgcgccgcgtgttttattagccgatgaagtgggc
ttgggtaagaccatcgaagcagggatgattattcatcagcaactgctagccggtcgcgca
gaacgcatcctgatcgtggtgcctgaaactctacagcaccagtggctggtcgaaatgctg
cgccgctttaacctgcgtttctcgctgtttgacgatgctcgttattcagaagccatgctg
gatgccaccaacccgtttgaaaccgaacagatggtgatttgctccctagacttcgtgcgt
cgcaaccgtcagcgtttagagcagatggccgatgcctcttgggatctgctcgtcgttgac
gaagcgcatcatctggcctggagcgaaaatgctcctagccgcgaatatcaggtgattgaa
cagcttgccgagcacattccgggcgtactgctactgacagcaactcctgagcaattaggc
caagagagccacttcgcacgtctgcgtctgctcgatccaaaccgcttccatgactatcaa
gaattcgtcagcgagcagcagaaatatcgtccggtggctgacgctgtcaccctgctgctc
aacgatggtcatttgaccaacgaagagctcaatatgctgagcgaaatgatcgccgagcaa
gatattgaaccgttactgaaagcggctaacgcaggcggcaccggcagcgtagatgcgcgc
aacgagctggtcaaaatgctgatggatcgccatggcactagccgcgtgttattccgtaat
acccgtcagggcgtgaaaggtttcccacagcgtgagctgcaccaaatcaccctgccgttg
ccttctcagtatcaaaccgcgattaaagtgtccggcattatgggcagcaagaaaacggtt
gaagcccgcgcgaacgatatgctgtacccagagcgtatttatcaggaatttgagggcgaa
aacgcaacctggtggaacttcgatccacgcgttgagtggctgatgaacttcctgacctca
caccgcgatgaaaaagtgttggtgatttgtgctcaggcggcttcagcggtcaatttggaa
caggtactgcgtgagcgtgaagcgatccgtgccgccgtattccatgaaggcatgaccatc
atcgaacgtgaccgtgcagcggcctacttcgcatcacaagaagaaggcgcacaggtgctg
ctgtgttctgaaattggttccgaaggacgtaacttccagtttgctcaccatttggtgatg
ttcgatctgccgtttaaccctgatttgctggaacagcgcatcggtcgtctggaccgcatt
ggccagaaccacgacatcaaaatttttgttccttgcctggaaaacaccgcgcagtcagtt
ttggttcgttggtatcacgaaggtctagatgcctttgagcacacctgtccaaccggtcgc
accatctatgacagcagctatcaaacgctgttgggctatttagcggcgccttctcagttg
gaaggctttgatgacttcatcaaagcgtgtcgtactcagcacgatgcgttgaaagcgcag
ttggagcaagggcgcgatcgtctgctagaaatgcattctaacggcggtgacgcggctcaa
gaactggcagaggccattgccgaccaagataacgatgtcggtttggttaactttgcgctg
aacctgttcgacattgttggtatcaatcaggacgatcagagcgacaacatgatcatcctc
acgccgtcagaacatatgctggtgcctgatttccctggtctgccgcaggatggttgtacc
gtgacttttgaccgcgaacaggctctgtcgcgtgaagacgctcagtttattagctgggag
catccgattattcgtaacggcttggatttaatcctctccggcgataccggtagctgcgcc
gtatccttgctgaagaacaaagcgctgcccgttggaacactgctgctggaagccatttat
gtggtcgaagctcaggcaccgaagcatctgcaactgacccgcttcctgccaccaacgccg
gtgcgtatgctgctcgatgccaaaggtactaatctggcggctcaggtcgagtttgagagc
tttaaccgtcagctgaactcgatcaaccgccatacctccagcaagctggtcaatgccgtt
cagccgaacgtgcacgctatgctacaggcaggtgaagcattgattggtgaacaagcgact
gcgttgatcaacgaagcgaagcgcgaagcagatgaaaaactgagcgccgagttagcgcgt
ttggaatccttgaaagccgttaacccgaatattcgtgatgacgagctggaaacgctggag
ttcaaccgtcgtcaggtccttgagaatctggatcaggcaggctggcgtctggatgcgatt
cgcctcatcgtggtgtcacatcaataa
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