Glaesserella parasuis SH03: JL26_08340
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Entry
JL26_08340 CDS
T03301
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hpas
Glaesserella parasuis SH03
Pathway
hpas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hpas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JL26_08340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpas02000
]
JL26_08340
Transporters [BR:
hpas02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JL26_08340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIK17783
LinkDB
All DBs
Position
complement(1621134..1622717)
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AA seq
527 aa
AA seq
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MKKFLALFLVGGVAALVVHYFQGDKATATETAKPTEPTTQTKQNDELALATVVAPWEINS
LDPNQTGVIFQRMNLAETLVEANLQGELVAGLATEWNSNEDATLWTFKLRPNVIFHNGQP
LTAQAVANSLNIALAKPGMLQKAFIKDIQAVSLTEIQIALTKSFVPFPSFLTHYTAIILA
PESYNDKGEVTQVIGTGAFKATKIEAPQKLETVRFEQYWGNKPKLAQANYLASSRSETRM
LMAQSDKSALVFNLDTASVERLKTDPNLNLTSVSIARTIQLKMDVAKPFFNDLAVRKALS
EAIDRKAIAEYVLKIEGGEADQILPKAFAEWRIDTTTAKPDLAKIKADLTARGYEFNSEG
KLTKDGKPFSFTLRTFSDRPELPMIATILQAQWKQIGVDVNVSVGNFSEIPAGHQDGSLE
MALYALNYGKTLDPFGVIVQDYAKTGSDWGVMNWQNATLDNALTQLETERDPQKAKALKQ
TVSQIIHDELPIIPVVYYQQNVVAHKDVKNVTLDPFERRFFLELLTK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttcttgccctatttttagtcggtggtgttgcagcgttggtggttcactat
tttcaaggtgataaagccacagcaacagaaacggcaaagccgactgaaccgacaactcaa
acaaagcaaaatgatgaacttgctctggcaacggtggttgccccttgggaaatcaatagc
cttgatccgaaccagacaggggtgatttttcaacgtatgaatttagcggaaaccttagta
gaagcgaatttacagggggaacttgttgcaggattggctaccgagtggaacagcaatgaa
gatgcgaccctttggacttttaaactccgtccgaatgtgattttccacaatgggcaacct
ttgactgcacaagcggtggcaaacagcctaaatattgcattggcgaaaccgggaatgttg
caaaaagcctttattaaagatattcaagcggtcagcctgacagaaattcaaattgcctta
accaaatcttttgtgccgtttccatcttttttaacacactacaccgcaattattcttgcc
cctgaaagctataacgacaaaggggaagtgacccaagtgatcggcacgggggcgtttaaa
gcgactaaaattgaagcaccacaaaaattggaaacggtgcgttttgaacagtattggggc
aataagccgaaactagctcaagcgaactaccttgcaagtagccgtagcgaaactcgaatg
ctgatggcacaaagcgataaatctgcgttggtgtttaaccttgataccgccagcgttgaa
cgtttgaaaaccgatccaaatttgaacttaaccagtgtgtctattgctcgtactattcag
ctcaaaatggacgtggcaaaaccattcttcaatgatttagcggtgcgtaaagccttaagt
gaagcgattgatcgcaaagcaattgcggaatatgtgttaaaaatcgaaggtggcgaagcg
gatcaaattctgccgaaagcctttgcggaatggcgaattgatacgacaacagcaaaacct
gatcttgcaaaaatcaaagcagatctaaccgctcgtggttatgaatttaatagcgaaggc
aagctaactaaagacggtaagccgtttagttttaccctacgcacattctccgatcgccct
gaattaccaatgattgcgacaattttgcaagctcaatggaagcagattggcgttgatgtg
aatgtgtctgtcggtaacttcagtgaaatccctgctggacaccaagacggcagtttagag
atggcactttatgctttgaactatggcaaaaccttagatccttttggtgtgatcgtgcag
gattatgcgaaaacaggaagtgattggggggtaatgaattggcaaaatgcgacgttagac
aacgctttaactcagcttgaaacagaacgtgatccacaaaaagcgaaggcgttaaaacag
acagtgagccaaattatccacgatgaactgccgattattcctgtggtgtactatcagcaa
aatgtggtggcacataaagacgtgaaaaatgtgactttagatccttttgaaagacggttc
tttttggagttactaacaaaataa
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