Helicobacter pylori B38: HELPY_0350
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Entry
HELPY_0350 CDS
T00950
Symbol
rluD
Name
(GenBank) Pseudouridine synthase (RNA-uridine isomerase) (RNA pseudouridylate synthase)
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpb
Helicobacter pylori B38
Brite
KEGG Orthology (KO) [BR:
hpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpb03009
]
HELPY_0350 (rluD)
Enzymes [BR:
hpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HELPY_0350 (rluD)
Ribosome biogenesis [BR:
hpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HELPY_0350 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAX28893
UniProt:
C7BYT2
LinkDB
All DBs
Position
complement(340457..341353)
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AA seq
298 aa
AA seq
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MPFVEEEFEILKPTKALFFVHDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVRLI
HFKPNEKTQALVFETKDFGVFDKPAQVYTHPKGYFYHESLLDCIQSHFSKNAHPAHRLDY
ETSGLVLAGKTLQSVKDLKALFMQKKVKKTYLALAHGLVEKSMKIDKPILTPQNIQKDLR
IRSKISPLGKPSITLVEPLSYNPFLDISLLKIIPLTGRTHQIRLHLSSINHRIVGEGLYG
VADENAREYLQLKRKNNAPLLMLHAASLEFEFKGAIYKIASPMPERFMPFLKDLPLFY
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccaccaaagccttgttttttgtg
cacgatgttttaaaatgctctttaaaagaagcccaacggcaccttgacaaacaacgcctg
aagcaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgttcgcttgatt
catttcaagcccaatgaaaaaactcaagcgcttgtttttgagactaaagattttggcgtg
tttgacaaacccgctcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ttagattgtatccaatcgcattttagcaaaaacgcccacccagcccacagattagactat
gaaacgagcgggttagttttagcgggcaagactttacaaagcgttaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttatttagcgttagcgcatgggttggttgaa
aaaagcatgaaaatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgc
attcgatctaaaatttctcctttaggcaagccttcaatcacgcttgttgagcctttaagc
tataacccttttttggatataagcttgcttaaaataatcccactcaccgggcgcacgcac
cagatccgcttgcatttaagcagtataaatcacaggatcgtgggcgaggggctttatggg
gtggcagatgaaaacgctagagaataccttcaattaaagcgtaaaaataacgccccatta
ctcatgctccatgccgctagtttagagtttgaatttaaaggagcgatctacaaaatcgct
tcccccatgcccgaacgcttcatgccgtttctaaaagatctaccgctcttttattga
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