Helicobacter pylori PeCan4: HPPC_05305
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Entry
HPPC_05305 CDS
T01322
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpc
Helicobacter pylori PeCan4
Brite
KEGG Orthology (KO) [BR:
hpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpc03016
]
HPPC_05305 (truA)
Enzymes [BR:
hpc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPPC_05305 (truA)
Transfer RNA biogenesis [BR:
hpc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPPC_05305 (truA)
Prokaryotic type
HPPC_05305 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF5534
Motif
Other DBs
NCBI-ProteinID:
ADO07274
UniProt:
E1Q326
LinkDB
All DBs
Position
1080891..1081619
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AA seq
242 aa
AA seq
DB search
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIEDALNALGIKSVVVAAGRTDKGVHANNQV
LSFYAQKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKRFTGKHDFSMFKKEGGATTNPKRAIFNAFAYKTFIIGHEC
VVFKVIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNIKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaactcggcgttcaggataaaatagaggacgctttaaatgcactagggatt
aaaagcgttgtggttgcggctgggcgcacggataaaggcgtgcatgcgaacaatcaagtg
ctatctttttacgctcaaaaacactggaatgccgctaaattattttattatctagcccct
aaactcgcccctcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcaccttatatcgcttgtggggattatggatcactggatgcattaaacaccgctttaaag
cgattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggggctacaaccaat
cctaaacgcgctatttttaacgcttttgcttataaaacctttatcatagggcatgagtgc
gtggtgtttaaagtcattggcgatgcgtttttacgctctagcgtgcgtttgatcattcaa
gcgtgcgttcaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacatcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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