Helicobacter pylori F30: HPF30_1319
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Entry
HPF30_1319 CDS
T01895
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpf
Helicobacter pylori F30
Brite
KEGG Orthology (KO) [BR:
hpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpf03016
]
HPF30_1319 (trmE)
Transfer RNA biogenesis [BR:
hpf03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPF30_1319 (trmE)
Prokaryotic type
Methyltransferases
HPF30_1319 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
ABC_tran
cobW
Arf
Ras
ATP_bind_1
MMR_HSR1_Xtn
ATP-synt_ab_N
AAA_29
FtsK_SpoIIIE
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
BAJ57416
LinkDB
All DBs
Position
1397273..1398625
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVHDIFSNGALLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEVLIDYSEEDIPS
DFLNEVSQNLEKQIASFKDLLDFSNMQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESTDKIERLGIEKSLKSLESCDIVLGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELETLKSYLKIPHSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAIENLNSLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagcgttatt
aaaatcagcggcaataacgctctaaacatcctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcacgatattttttctaatggtgctttattagacaaagcg
ctagtgatctatttcaaagccccctatagtttcaccggcgaagatgtgtgcgaaatccaa
tgccatggcaacccccttttagcgcaaaatatcttacaagcttgtttgaatttaggggct
agacttgctaaagcgggggaatttagtaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaggctagaggcaatctt
ttaaagcttttagccagctcagaagttttgattgattatagcgaagaagacattcccagc
gattttttaaatgaagtgtctcaaaatttagaaaaacaaatcgcctcttttaaagactta
ctggatttttctaacatgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctccctattgaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcacagataaaatagaacga
ttagggattgaaaaaagccttaaaagtttagaaagttgcgacatcgttttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaacctgattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcgcccaaactggagcttgaa
accttaaaatcttatcttaaaatccctcattctttactagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagcgcctttttccccaaactagacact
caaaacaagcttttactcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttagagcttttttcttatcatctttta
agcgcgatagaaaacttgaactcgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttgggcaaatga
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