Helicobacter pylori SJM180: HPSJM_07380
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Entry
HPSJM_07380 CDS
T01323
Name
(GenBank) outer membrane protein HomD
Organism
hpm
Helicobacter pylori SJM180
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HP_OMP
TonB_N
Motif
Other DBs
NCBI-ProteinID:
ADO03032
UniProt:
E1Q2A1
LinkDB
All DBs
Position
1485070..1487328
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AA seq
752 aa
AA seq
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MLKLASKTICLSLIGSFTAVEAFQKHQKDGFFIEAGFETGLLQGTQTQEQTIATTQEKPK
PKPKPKPKPKPKPITPQSTYGKYYISQSTILKNATELFAENNITNLTFYSLTPVYVTAYN
QESAEEAGYGDSSLIMIQNFLPYNLNNIELSYTDDQGNVVSLGVIETIPKQSQIILPASL
FNDPQLNADGFQQLQTNTTRFSDANTQNLFDKLSRVTTNLQMTYINYNQFSSGNGTGSKP
PCPPYENQANCVAKVPPFTSQDAKNLTNLMLNMMAVFDSKSWEDAVKNAPFQFSDNNLSK
PCYSDYSTCVNPYNDGLVDSKLIAKNAGDEYNIENGQTGSVILTPQDVIYSYRVTNNLYV
NLLPPRGGDLGLGSQYGGPNGPGDDGTNFGALGILSPFLDPEILFGKELNKVAIMQLRDI
IHEYGHTLGYTHNGNMTYQRVRMCEENNGPEERCQGGKIEQVNGQEVQVFDNGHEVRDTD
GSTYDVCSRFGGQGQPAFPSSYPNSIYTDCSQVPAGLIGVTSAVWQQLIDQNALPVDYTN
LSSQTNYLNASLNTQDFATTMLSAISQSLSSTKSSATTYRTSKTSRPFGAPLLGVNLKMG
YQKYFNDYLGLSSYGIIKYNYAQANNEKIQQLSYGVGMDVLFDFITNYTNEKNPKNNLTK
KVFTSSLGVFGGLRGLYNSYYLLNQYKGSGNLNVTGGLNYRYKHSKYSVGISVPLVQLKS
RVVSSDGTTTNSITLNEGGSHFKVFFNYGWIF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaactcgctagcaaaacgatttgtttgtccctaatcggatcattcaccgctgtt
gaagcctttcaaaaacaccaaaaagatggcttttttatagaagctggctttgaaactggg
ctattgcaaggcacacaaacccaagaacaaaccatagccaccactcaagaaaaacccaaa
ccaaaacccaaaccaaaacccaaacccaagcccaagcccattacccctcaaagcacctat
gggaaatactacatctcccaaagcaccattttaaagaatgcgactgagttgtttgcagag
aataatatcaccaacttaaccttttattctttaacccctgtgtatgtaaccgcttataac
caagaaagcgctgaggaagctggctatggcgatagcagcttgattatgatacaaaacttc
ctgccttataatttaaacaatattgagctgagttatacagacgatcaaggcaatgtagtc
agtttgggcgtgatagagactatccctaaacaatctcaaatcattctgcccgcaagcttg
tttaacgatccgcaacttaacgccgatggcttccaacaactccaaaccaacaccacacga
ttttctgatgccaacacgcagaatttgtttgataagctcagtagggttacgaccaatctt
caaatgacttatatcaattacaaccaattttctagcggtaacggcactggttctaaaccc
ccatgccccccatacgaaaaccaagcaaattgcgtggctaaagtgccgcctttcacctct
caagacgctaagaatttgaccaatttaatgctgaacatgatggcggtgtttgactctaaa
tcttgggaagacgccgttaaaaacgccccctttcagtttagcgacaacaacctgtcaaag
ccatgttattctgattattctacatgcgtgaatccttacaacgatgggcttgttgattct
aaattgatcgctaaaaatgctggagatgaatacaatatagaaaacgggcaaacaggctca
gtgatattaacgccgcaagatgttatctatagctatagagttacgaataatctttatgtg
aatctcttgcccccaagaggaggggatttagggctagggtctcaatatggcggtccgaat
ggcccaggcgatgatggcaccaattttggcgctttagggatattgtctcctttcttagac
cctgaaatactctttggcaaagaattgaataaagtcgccatcatgcaattaagagacatc
atccatgaatatgggcatactttgggctatacgcataatgggaacatgacttatcaaaga
gtgcgcatgtgtgaagaaaacaatgggccagaagagcgctgtcagggcgggaaaatagag
caagtgaatggacaagaagtgcaagtgtttgacaacgggcatgaagtgcgagacaccgat
ggctctacctatgatgtgtgttctcgttttggcggccaaggccagcccgctttccctagc
agttaccccaattccatttatactgattgctctcaagtccccgccgggcttataggcgtt
accagcgctgtttggcaacaactcattgatcaaaacgccctaccggtggattacactaat
ttgagcagccaaaccaactatttaaacgctagtttgaacacgcaagactttgcgaccacc
atgcttagtgcgatcagtcaaagcctttcatctactaaatctagcgccactacctatcgc
acttcaaaaacctcacggccctttggagcccccttattaggcgttaatcttaaaatgggc
tatcaaaaatattttaatgattacctagggttgtcttcttatggtattatcaaatacaac
tacgctcaagccaacaacgaaaaaatccagcaattaagctatggtgtgggaatggatgtg
ctgtttgattttatcaccaattacactaacgaaaagaaccctaaaaacaatctaaccaag
aaagttttcacttcctctcttggggtgtttggggggttaaggggcttatacaatagctat
tatttgctgaaccaatacaaagggagcggtaatttaaatgtgaccggtgggttgaattac
cgctacaagcattctaaatattctgtaggcattagcgttcctttagtccaattgaaatct
agggtcgtttctagcgatggcacaactaccaattctatcaccctgaatgaagggggcagt
cattttaaagtgtttttcaattacgggtggattttctag
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