Helicobacter pylori India7: HPIN_03075
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Entry
HPIN_03075 CDS
T01918
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
hpn
Helicobacter pylori India7
Pathway
hpn02020
Two-component system
hpn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPIN_03075
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPIN_03075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpn03021
]
HPIN_03075
Transcription machinery [BR:
hpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPIN_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3288
Motif
Other DBs
NCBI-ProteinID:
ADU79853
UniProt:
E8QFU1
LinkDB
All DBs
Position
602002..603246
Genome browser
AA seq
414 aa
AA seq
DB search
MAILRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKNSSDHLENFAIASKSLFETLETQIIPPLFPTETSQKIAMDIISGLNSEGYFEENIEE
RAKILGVESEVYEKVRKRFSYLNPAGIGAKDVKESFLFQLESRELDNNELYEEARKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDNEIIVRLNDESY
PTISLEENRFKDSDYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKKLRPL
KLLDLANEFNYSVSTISRAISNKYLACEKGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttacgcgcaaaccttagccctaaaaacaaattaaacgctaccttaaagggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgcc
ttggataaccccttaatcaaaattgaaaacaaacgcatcaaaaattttagcgatcgtttt
agcgctaaaaacagcagcgatcatttagaaaatttcgcaatcgcctctaaaagccttttt
gaaaccttagaaactcaaatcattccccccctctttcccactgaaacctctcaaaaaatc
gctatggatattatcagcgggttaaatagtgaagggtattttgaagaaaacattgaagaa
agggctaagattttaggagtagagagcgaagtttatgaaaaagtgcgcaagcgttttagt
taccttaatcccgctggcattggcgctaaagatgtgaaagagagctttttattccagtta
gagagtagggaattagacaataacgagctttatgaagaagcgcgaaaaatcattttgaat
ttagaaaaacaccacgaattttctaaagatttttattacgaaaaggctttaaagatttta
aaatcctttaaaaaccccccagccattgagtttttagaaaaagaaatagaagtcattcct
gagctttttattttagaagtggataatgaaatcatcgtgcgtttgaatgatgagagctat
ccgacaatcagtttggaagaaaatcgctttaaagatagcgattatttaaaagaaaaatta
aaagaggctaaagatttgattgatgcgctaaatttgagaaaagccacgatttataaaatc
ggcctcatgcttttagagtatcaatacgatttttttaagggtaaaaaattgcgccctttg
aaattgttggatttagccaatgagtttaactactctgtaagcacgatttcaagggccatt
tctaataaatatttggcatgcgaaaagggggttttccctatcaaacatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactatcttttagaattgatc
aaaaacgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtaagaagaacgatcaccaaataccgccaactgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgcgcttga
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