Helicobacter pylori 35A: HMPREF4655_20046
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Entry
HMPREF4655_20046 CDS
T01892
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpo03016
]
HMPREF4655_20046 (trmE)
Transfer RNA biogenesis [BR:
hpo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HMPREF4655_20046 (trmE)
Prokaryotic type
Methyltransferases
HMPREF4655_20046 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
cobW
Ras
Arf
ATP_bind_1
MMR_HSR1_Xtn
iSTAND
AAA_29
ATP-synt_ab_N
FtsK_SpoIIIE
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
ADU40220
LinkDB
All DBs
Position
36381..37733
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISVIKISGNSALNILKQLTQKQDFTPRYAYVRDIFSNGVLLDKV
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPS
DFLNEVSLNLEKQIASFKDLLDFSNMQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKSLENCDIVLGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAIENLNSLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagcgttatt
aaaatcagcggcaatagcgctctaaacatcctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcgcgatattttttctaatggtgttttattagacaaagtg
ttagtgatttatttcaaagccccctatagtttcaccggcgaagatgtgtgcgaaatccaa
tgccatggaaacccccttttagcgcaaaatatcttacaagcttgcttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaggctagaaataatctt
ttaaagcttttagcgagttcagaagttttgattgattatagcgaagaagacattcctagc
gattttttaaatgaggtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ctggatttttctaacatgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctccctattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcgcggacaaaatagagcga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacatcgttttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaaccttattgacacccttaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcgcccaagctggagcttgaa
atcttaaaatcttatcttaaaatcccttattctttactagagaccaacaccctaaattcc
aaggcttgtctgaaagatttgagccaaaaaatcagcgcctttttccccaaactagacact
caaaacaagctcttactcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttagagcttttttcttatcatctttta
agcgcgatagaaaacttgaactcgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttaggcaaatga
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