Helicobacter pylori 35A: HMPREF4655_20588
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Entry
HMPREF4655_20588 CDS
T01892
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpo03009
]
HMPREF4655_20588
Enzymes [BR:
hpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HMPREF4655_20588
Ribosome biogenesis [BR:
hpo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF4655_20588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADU40716
LinkDB
All DBs
Position
complement(563840..564721)
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AA seq
293 aa
AA seq
DB search
MPFVEEEFEILKPIKALFFVRDVLKCSLKEAQCHLDKQRLKQNQQAVRKSQMIQGVVSLI
HFRPNEKTQALVFETKDFGVFDKPPQVYTHPKGYFYHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALVHGLVDRSIVIDKPILTPQNIQKDLR
IKSKISPLGKPSTTLVEPLSYNPFLDISLLKITPITGRTHQIRLHLSSVGHRIVGEGLYG
VIDENAREYLQLKRENNAPLLMLHASSLEFEFKGAIHEITSPMPKRFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccattaaagccttgttttttgtg
cgcgatgttttaaaatgctctttaaaagaagcccagtgccaccttgacaaacaacgcctg
aaacaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgttagcttgatt
catttcaggcctaatgaaaaaactcaagcgcttgtttttgaaacgaaagattttggcgtg
tttgacaaaccccctcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ctagattgtatccagtcgcattttggcaaaaacgcccacccagcccacagattggactat
gaaacgagcgggttagttttagcgggcaagactttacaaagcgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttatttggcgctagtgcatgggttggttgat
agaagtatcgtcatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgt
attaaatctaaaatttctcctttaggcaagccttcaaccacgcttgttgagcctttaagc
tataacccttttttggatataagcttacttaaaattacccccataaccgggcgcacgcac
cagatccgcttgcatttgagcagcgtgggtcacaggatcgtgggtgaggggctttatggg
gtcatagatgaaaacgctagagaatacctccaattgaagcgtgaaaacaacgccccatta
ctcatgctccatgcctctagtttggaatttgaatttaagggggcgatccatgagatcact
tcccccatgcccaaacgcttcatgccgtttttaaaagattga
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