Helicobacter pylori 35A: HMPREF4655_21283
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Entry
HMPREF4655_21283 CDS
T01892
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpo
Helicobacter pylori 35A
Brite
KEGG Orthology (KO) [BR:
hpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpo03016
]
HMPREF4655_21283 (truA)
Enzymes [BR:
hpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HMPREF4655_21283 (truA)
Transfer RNA biogenesis [BR:
hpo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF4655_21283 (truA)
Prokaryotic type
HMPREF4655_21283 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADU41363
LinkDB
All DBs
Position
1289981..1290709
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AA seq
242 aa
AA seq
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MRCFKATIAYDGVYFLGYAKQPNKLGVQDKIESALNALGIKSVVVAAGRTDKGVHANNQV
LSFYAPKHWNAAKLFYYLAPKLAPHVVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFIAGHEC
VVFKVIGDAFLRSSVRLIIQACVQYSLEKITLAEIQTQIHNTKAAIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggtgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagcgctttaaatgcgttagggatt
aaaagcgttgtggttgcggctggacgcacggataaaggcgtgcatgcgaacaatcaggtg
ctgtctttttacgctccaaaacactggaacgccgctaaattattttattatctagcccct
aaactcgccccgcatgttgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatgcgttaaacaccgctttaaag
caattcacaggcaagcatgatttttccatgtttaaaaaagaaggcggagcgacaaccaat
cctaaacgcactatttttaacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaagtcattggcgatgcgtttttgcgctccagcgtgcgtttgatcattcaa
gcgtgcgttcaatactccttagaaaaaatcacactcgctgaaattcaaacgcaaatccac
aataccaaagccgctataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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