KEGG   Halomonas profundus: LMS44_01180
Entry
LMS44_01180       CDS       T08361                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3f
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
hpro  Halomonas profundus
Brite
KEGG Orthology (KO) [BR:hpro00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpro02048]
    LMS44_01180 (cas3f)
Enzymes [BR:hpro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LMS44_01180 (cas3f)
Prokaryotic defense system [BR:hpro02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    LMS44_01180 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD HD
Other DBs
NCBI-ProteinID: UEQ04504
LinkDB
Position
250495..253839
AA seq 1114 aa
MNVLLISQCNKNALKETRRILDQFAERRGDRTWQTPITQAGLDTLRKLLRKKARKNTAVA
CHWIRGHDHSELVWVVGDASRFNIQGAVPTNITARDILRSRDENDWHNGEDILLLTALAA
LLHDLGKACDAFQQRLKGKVEGRNLYRHEWISLRLFQAFIGSDDDATWLARLAEGDYQTQ
DWLGGLERDGIDAPTSAVFSRLPPLAAALGWLVLSHHRLPLKPPEKVGENERRWGRGNAP
LQAEQLPALFESINAEWNEIPETQDPKCIAPYWQFKSGLPVSTPRWRDRATKLATRLQAR
LQNSSHWLESRYVMHLARLSLMLADHHYSSLEDLQHRVRGEPNYPLIANTVRKTGKPNQL
LDEHILGVEKHAAAVARALPSVDSHLPRLARHKGFRKRSSHPRFRWQDKAFDLAQSLRER
SQRQGFFGINMASTGCGKTLANGRIMYALADPQQGARFSIALGLRTLTLQTGQALRDRLH
LGEDELAVRVGGSANKALFEHYEQEAEASGSASNQALIEEDAHVVFDGNFDSHPVLRRLS
DEPGTRALIAAPILVCTVDHLVPATESTRGGRQIVPMLRLMSSDLVLDEIDDFDINDLPA
LTRLVNWTGLLGSRVLLSSATLPPALVEGLYEAYRSGREAFQRHRGEPGLATDICCAWFD
EHDRQHENCASNETFKTAHQAFAKRRLERLSTSPVRRRGDILSLPSLGKRPEEIRPAVSA
LLREHALALHQQHHSVDPHTSKRVSFGLIRMANIDPLVDVARALFQQGAPEGVRIHLCAY
HSRHPLVMRSEIERRLDRTLQRAEPDRVFQQPDIRRLMDSSEENDHLFIVLGSPVTEVGR
DHDYDWAIVEPSSMRSIIQLAGRVRRHREQACEVANILLLETNLKHLERGDEPAFHKPGF
ETKMAWRLNSHSLNTLLTPDEYQVIDARPRVLARETLHAKDSLVDLEHERLHQLMIEQPA
EPLTKKELRIGKTPKPPPLGAYSWHGMPQLHLTGVLIQRDPFRKQLEPEITLALLPDEGG
ETWTLHRVDDGARRGEKLYVPVEESLLVRVNLAKEQGERIQPWGASDYLTALADLAEDLD
ISLDRAARTFGTVTASARNQRWGYHPVLGFWRSK
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgaacgtgctgttgatttcccagtgcaacaagaacgccctgaaagagacgcgccgcata
ctcgaccagtttgccgaacgccggggcgatcgcacttggcaaacaccgatcacccaggcc
gggttggatacgctgcgcaaattgctgcgtaagaaagcgcgtaagaacaccgccgttgcc
tgccactggattcgtggccatgaccacagcgaattggtgtgggtggtgggggatgcctcg
cggtttaatatccagggcgcagtgccgaccaacatcactgcccgcgatattctgcgcagt
cgtgatgaaaacgattggcacaatggtgaagatatccttttgctcaccgcgctggctgcg
ctactgcatgacctgggcaaagcctgcgacgcctttcagcagcggctaaaaggcaaagta
gaagggcgcaacttataccgtcatgagtggatatcgctgcgcttgttccaagcgtttata
ggcagtgacgatgacgctacttggttggcgcgcctcgcggaaggcgactatcaaacgcag
gactggttaggtggattggagcgcgatggaatagacgctcctacctcggcagtgttcagc
cgattaccgccgctggcggctgcgctgggttggctggtgcttagccaccaccggctaccg
ttaaaaccgccggaaaaagttggcgaaaatgaaaggcgatgggggagaggaaatgcgccc
ctacaggccgaacaactgcccgcgttatttgagtcgataaacgccgagtggaacgagatt
cctgaaacgcaagaccctaaatgcatcgcgccctattggcagttcaagagtggattgccc
gttagtaccccacgctggcgtgatcgtgctaccaagcttgccacacggttacaggcgcgg
ctgcaaaatagcagtcactggctggaaagccgctatgtcatgcacttagcccggcttagc
ttaatgctggctgaccaccactactctagcctggaagacctccagcatcgcgtgcgcggc
gagcccaactacccgctgattgccaataccgtgcgcaaaaccggcaagcccaatcagcta
ttggatgagcatatcctgggagttgaaaaacatgccgccgcggtcgcccgtgcgctaccc
agcgttgacagccacttaccacgtctagcgcgccataaaggcttccgtaaacgcagcagt
cacccacggtttcgctggcaggataaagcctttgatctggcccaatcgcttagggaacgt
agccaacggcagggcttttttggcatcaatatggcgtccaccggctgtggtaaaacctta
gcgaatggccgcattatgtacgctctggccgatccccagcagggtgcgcgctttagcata
gccctagggctgcgcaccctaactctgcaaactggccaagcattacgtgaccgtctgcat
ctgggcgaagatgaactcgccgtgcgggtaggtggcagtgccaataaagccctgtttgag
cactacgagcaggaagccgaagccagcggctcggcatccaatcaggcgctgatagaagaa
gatgcccacgtggtgtttgacggcaattttgatagccaccccgtgctgcgtcgtttgagc
gatgagccgggcacccgcgcgctgattgccgcccccattttggtatgtacagttgatcat
cttgtgcctgccacggagagcacccggggcgggcgtcaaatcgtgcccatgctgcgccta
atgagcagtgacctagtgctggatgagatcgacgatttcgatatcaacgacctaccggcg
cttacccggctcgtcaattggactgggctgctagggtcacgggtactgctttcatcggcc
accttgccgcctgcgctggtggagggtttgtatgaagcctatcgcagcggtcgtgaagcc
tttcagcgtcatcgcggcgagccgggattagcgaccgatatttgctgcgcctggttcgac
gagcacgaccgacagcatgaaaactgcgccagtaacgagactttcaagaccgcgcatcag
gcctttgccaagcgtcggttagagcgcctatctactagcccggtgcgccgccgtggcgat
attttgtcgttgccatcgctgggtaaacggccagaagaaattaggcccgcggtttcagcg
ctgctacgcgagcatgcgctagcgcttcaccagcagcaccactccgttgatcctcacacc
agcaaacgcgtcagctttggtttgattcgaatggccaatatcgaccccttggtggacgta
gccagagcactttttcagcagggtgcccctgaaggtgtgcgcattcacctctgcgcctac
cactcccgacacccgttggtcatgcgctcagaaattgagcgccggttagatagaacactg
caacgggctgagccagatcgcgtattccagcagccggatatccgccgcctgatggatagc
agcgaagagaacgaccacctgtttattgtgcttggctcgccggtaacggaagtgggtcgc
gaccacgattatgattgggcgattgttgaaccgtcctccatgcgttcgattattcagtta
gcgggccgggtgcgccgtcaccgtgagcaggcctgcgaggtggcgaatattctgctcctg
gagaccaacctaaagcacctggagcgcggggatgaacccgcttttcataagccaggcttc
gaaacgaagatggcctggcgtcttaatagccactcacttaacacacttcttacgccagat
gagtatcaggtgatcgatgcacgcccccgcgtgctggcgcgagaaacgctccacgccaaa
gatagcctggtagacctggagcacgagcggctgcaccaattgatgattgagcagcccgcc
gagccgttaaccaaaaaagagctacgaatcggtaaaacccccaagccaccgcccttggga
gcctatagctggcatgggatgccgcaactgcatttaaccggtgtattgattcagcgtgac
ccatttcgcaagcagctcgaacccgagataacgctagcgctgttgccggacgagggcggc
gaaacctggacgctacatcgcgtagacgatggcgcaaggcgaggcgaaaagctctacgtt
ccggtggaagaaagcctgctggtgcgggtaaatctagcaaaagagcagggtgagcggatt
caaccctggggtgcaagtgattacctaacggcgctggctgacttagcggaagacctggat
atctcccttgatcgcgccgcgcgtaccttcggcacggtaaccgcctcggctagaaaccag
cggtgggggtatcacccggtgttgggattttggaggagtaaatga

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