Halomonas profundus: LMS44_16755
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Entry
LMS44_16755 CDS
T08361
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpro03021
]
LMS44_16755 (rpoS)
Transcription machinery [BR:
hpro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMS44_16755 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4168
Motif
Other DBs
NCBI-ProteinID:
UEQ02923
LinkDB
All DBs
Position
complement(3671298..3672269)
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AA seq
323 aa
AA seq
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MSMLEKDLQEVDLDAAEEALDDTDDVTVEEDAFEKALGREDRQSTQSLDATQIYLNEIGF
SPLLTPEEEVYYGRLARKGDPLGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLGL
IRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELTQ
KFDHEATAEEIADHLDKPVDVVKKMLGLNERVSSVDYPMGGESDKPLIDTLADDEVQGPE
ARLVDGDVKEHVDLWLDELSEKQREVVVRRFGLRGHESATLEEVGAEIGLTRERVRQIQV
EALKKLRRALEKQGLSLEALFET
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttggagaaagatctacaggaggttgacctggatgctgctgaggaggcgctt
gatgatactgatgatgtcacggtagaagaagacgctttcgagaaagcactagggcgcgag
gatcgtcaatcgacccaaagcttggatgcgacgcaaatctacctcaacgaaatcggcttt
tcgccactgctaacaccagaagaagaagtttactacggccgcctggcgcgtaagggtgac
cctctagggcgctcgcggatgattgagtccaacctgcggcttgtggtgaagattgcccgc
cgctaccttaaccgtggcttgacgctgctggatttgatcgaagagggcaatttgggcctg
attcgtgctgtggagaagtttgacccggagcgtggcttccgtttctcgacctacgccact
tggtggattcgtcagaccatcgagcgggcgctaatgaatcagacgcggacgatacgcctg
cccattcatgtggtcaaagagctcaatatttacctgcgggcggcgcgggaattaacccag
aagttcgaccacgaagccactgccgaagagatcgccgatcaccttgataaaccggttgat
gtggtcaaaaagatgcttggccttaatgagcgagtgtcgtcggtcgattaccccatgggg
ggcgagagcgataagccgctgatcgatacgctggcggacgatgaagttcagggccctgaa
gcacgcttggtggatggtgacgtcaaggagcatgtggatttgtggttagacgagctgagc
gaaaaacagcgcgaggtagtggtgcgccgttttggcttgcgaggccacgagtcggccacc
ctggaagaagtgggcgctgaaattggcttaacccgtgagcgggtgcgccagatccaggtc
gaagcgctcaagaaactacgccgtgcattggaaaaacagggcctttctttagaggcgctg
tttgaaacctga
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