Halomonas profundus: LMS44_16780
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Entry
LMS44_16780 CDS
T08361
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpro
Halomonas profundus
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpro03016
]
LMS44_16780
Enzymes [BR:
hpro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LMS44_16780
Transfer RNA biogenesis [BR:
hpro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMS44_16780
Prokaryotic type
LMS44_16780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UEQ02928
LinkDB
All DBs
Position
complement(3676032..3677063)
Genome browser
AA seq
343 aa
AA seq
DB search
MINMPEWQRCLDAQFGSPKPGQYRAQPEDFWVDEQLDFSPEAHGEHLWLRVEKRNQTTLD
VVNTLSRLCGVTPRDIGYSGMKDRIAVTRQWLSVHLPGRDAPTELEQSLNALGITVVEQA
RHPRKLKRGVHRTNRFVLRLSGEAIESEDFVSRWEALCQHGVPNYFGPQRFGPEGRNLQR
AEALLNRGWRKRDDRQGMMLSTARSFLFNELLSARIADGTWSQPLAGDTLILDGTQSVFR
IDASDHTLQARAAELDVHPTGVLWGVGEADQGDAAGYEARLLEHYPGLCSGLQRSGVKQA
RRALRMRLLEPQYAWESGAVRLSFSLPRGSFATAVLGELMLAN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatgcctgagtggcagcgctgtctcgatgctcaatttggctctcccaaaccg
ggccagtaccgtgcccagccggaagatttttgggtcgatgagcagctggatttcagccct
gaagcacacggggaacatttgtggctgcgagttgaaaagcgcaatcaaaccacgttagat
gtcgtcaatacattaagtcggctttgtggcgtaacgccccgtgatattggttactccggc
atgaaagaccgcattgccgtcacgcgccagtggctgagcgtgcatctgcccggccgcgac
gcgcccacggagcttgagcagtcgcttaatgcgctggggatcactgtcgttgagcaggcg
cgccacccacgtaagctgaagcgtggcgttcaccgcactaaccgttttgtattgcgcctt
agcggtgaggccattgaaagcgaagattttgtcagccgctgggaagccctttgtcagcat
ggcgtgcctaactattttggcccccagcgctttgggcccgaaggacgtaatcttcagcgt
gccgaagcattacttaaccgaggttggcgaaaacgcgacgatcgccagggtatgatgctc
tccactgcgcgcagttttttgtttaacgaactgctcagcgcgcgcattgcggatggcacc
tggtcgcagccgctggcgggagacacgttgattctggacggcacccaaagtgtgtttcgt
atcgacgcctccgaccatacgcttcaggcccgcgccgctgaactggatgtgcatcccact
ggggtgctttggggcgttggtgaagctgaccagggcgacgccgctggctatgaagcccgt
ttgctggagcactaccctgggctatgcagtggcttacaacgcagcggagtaaagcaggca
cgccgtgcacttcgtatgcggctgctggaaccccagtatgcttgggagtcaggtgctgtc
cggctttcgttttcgctgccgcggggcagctttgccaccgctgtgctgggtgagctgatg
ttagcgaactga
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