Helicobacter pylori Shi470: HPSH_02550
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Entry
HPSH_02550 CDS
T00742
Name
(GenBank) type II restriction endonuclease
Organism
hps
Helicobacter pylori Shi470
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Gene cluster
GFIT
Motif
Pfam:
RE_HaeIII
AAA_lid_12
Motif
Other DBs
NCBI-ProteinID:
ACD47960
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Position
complement(492215..493168)
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AA seq
317 aa
AA seq
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MSDKSNNQGRAYEYAWCLALEQKLSVFKKVIVDKQNGFNACYRAYESLEKSLQDRYLESA
KQGVLLLLDCEPLLNEVIESSQNEITLSLQKDKLGEIGDIRDILIYFDRFCIGLSIKHNH
DAVKHSRLSKDLDFGKKWLGVGVSQNYKDTIKPLFERLENAKKEGMLWRDFPNKEQEIYA
PLLQAFKKEVLRIDENKKNKVPQKMVEYLLGKYDFYKAILLEREQKTKLEAYHFNNTLNR
SVKNKPKRIIPLSKLPTRMIYFDFKPKSFNTLELVLDEGWSFSLRIHNASSRVEPSLKFD
IKLLSKPESVAVFIVGF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgataagagcaataatcaaggtagggcgtatgaatacgcatggtgtttagctttg
gagcaaaaattgagcgtttttaaaaaggttatagtggataaacaaaatggttttaatgca
tgctatagagcttatgaaagtttagaaaaatctctacaagatcgttatttagaaagcgct
aaacaaggcgtattgcttttattggattgtgagccattattaaacgaagtcatagagagt
tcgcaaaatgaaatcaccctatcattgcaaaaagacaaacttggtgaaataggtgatatc
cgggatattttaatttattttgatagattttgcataggattaagcattaaacataaccat
gatgcggtaaaacattctagactttctaaagacttggattttggaaaaaaatggctgggt
gttggagtgtctcaaaattataaagacactataaaaccactatttgaaagactagaaaac
gctaaaaaagaaggcatgttatggagggatttccctaataaagaacaagaaatttatgcc
ccattattacaagcttttaaaaaagaggttttaagaattgatgaaaataagaaaaataaa
gtcccacaaaaaatggtggagtatttgctaggcaaatatgatttttacaaagcgattttg
ttagaaagagaacaaaaaactaaattagaggcataccattttaataatactcttaatcgt
agcgtgaaaaataagcctaaaagaattatccctttaagcaaattgcctactagaatgatt
tattttgatttcaaacccaaaagtttcaatactttagaattggttttagatgaagggtgg
tcattttcattacgaatccataatgcaagctctagggtagaaccaagcttgaaatttgat
ataaaattgctttcaaaacctgagagtgttgcagtttttatagtagggttttag
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