Hydrogenophaga pseudoflava: HPF_09385
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Entry
HPF_09385 CDS
T06073
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPF_09385 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_09385 (xseB)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPF_09385 (xseB)
DNA repair and recombination proteins [BR:
hpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPF_09385 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CENP-Q
BMFP
Motif
Other DBs
NCBI-ProteinID:
QBM27898
UniProt:
A0A4P6X099
LinkDB
All DBs
Position
1931912..1932178
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AA seq
88 aa
AA seq
DB search
MTSPTPTKSTRSSRSADASATPASYEAALEELEQLVAQLDAGQLPLDQLLGRYQRGAELL
AYCRTRLEAVEQQIKVLENGEPKPWDGQ
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccgacccccacaaagtccacccgatcaagccgctcggccgacgcgtctgcc
accccggccagctacgaggccgcgctggaggagctggagcagctggtcgcccagctggat
gcggggcagttgccgctggaccagctgctgggtcgctaccagcgcggcgccgagctgctg
gcctactgccgcacccggctggaggcggtggagcagcagatcaaggtgctcgaaaacggc
gagcccaaaccctgggacggccaatga
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