Helicobacter pullorum: NCTC13154_00666
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Entry
NCTC13154_00666 CDS
T08673
Symbol
hupB
Name
(GenBank) DNA-binding HU-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
hpul
Helicobacter pullorum
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpul03032
]
NCTC13154_00666 (hupB)
03036 Chromosome and associated proteins [BR:
hpul03036
]
NCTC13154_00666 (hupB)
03400 DNA repair and recombination proteins [BR:
hpul03400
]
NCTC13154_00666 (hupB)
DNA replication proteins [BR:
hpul03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC13154_00666 (hupB)
Chromosome and associated proteins [BR:
hpul03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC13154_00666 (hupB)
DNA repair and recombination proteins [BR:
hpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC13154_00666 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
VEJ06995
LinkDB
All DBs
Position
1:643590..643880
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AA seq
96 aa
AA seq
DB search
MNKSEFVDLVKQVGEYETKKEAEKAISAFVAAIEKALSKKDGSVELVGFGKFETVLQKGK
EGTVPGTNKKYKTKDKFVPKFKAGKGLKDAVAAAKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaatttgttgacttagtaaaacaagtcggtgagtatgaaacaaaaaaa
gaagctgaaaaagcaattagtgcattcgttgctgcaattgaaaaagctctttccaaaaaa
gatggtagtgttgaacttgtaggttttggtaaatttgaaactgtgcttcaaaaaggaaaa
gaaggaacagttccaggaacaaataaaaaatataaaacaaaagataaatttgttcctaaa
tttaaagcaggtaaaggtcttaaagacgctgttgcagctgcaaaaaaataa
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