Helicobacter pylori 2018: hp2018_0348
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Entry
hp2018_0348 CDS
T01914
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpw
Helicobacter pylori 2018
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpw03009
]
hp2018_0348
Enzymes [BR:
hpw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
hp2018_0348
Ribosome biogenesis [BR:
hpw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
hp2018_0348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADZ51031
LinkDB
All DBs
Position
complement(341352..342233)
Genome browser
AA seq
293 aa
AA seq
DB search
MPFVEEEFEILKPTKALFLVRDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQIIQGVVSLI
YFKPNEKQERLVFEAKDFGAFDKPAQIYTHPKGYFDHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKTLQSTKDLKALFMQKKVKKTYLVLTHGLVDKSIIIDKPILTPENIQKDLR
IRSQISPLGKPSITLVEPLSYNPFLDISLLKITPLTGRTHQIRLHLSSVNHRIVGEGLYG
VADENAREYLQLKRENNAPTLMLHAASLEFEFKGAHYKIASPMPKRFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccaccaaagccttgtttttggtg
cgcgatgttttaaaatgctctttaaaagaagcccaacggcaccttgacaaacaacgctta
aaacaaaaccaacaagccgtgcgtaaatctcaaatcattcaaggggtcgttagtttgatt
tatttcaagcctaatgaaaagcaagaaagacttgtttttgaggctaaggattttggcgca
tttgacaaacccgctcaaatttatacccaccctaaaggctattttgaccatgaaagctta
ttggattgtatccaatctcattttggcaaaaacgcccacccagcccacagactggactat
gaaacgagcgggttagttttagcgggcaaaaccttacagagcaccaaagatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttatttggtgctaacgcatgggttggtggat
aaaagtatcatcatagataagcccattctaacgccagaaaacattcaaaaagatttgcgc
attcgatctcaaatttctcctttaggcaagccttcaattacccttgttgagcctttaagc
tataacccttttttggatataagcttgcttaaaataaccccgctcactgggcgcacgcac
cagatccgcttgcatttaagcagcgtgaatcacaggatcgtgggtgaggggctttatggg
gtggcagatgaaaacgccagagaataccttcaattgaagcgtgaaaataacgccccaacc
ctcatgctccatgccgctagtttagaatttgaatttaaaggggcgcattataaaatcgct
tcccccatgcccaaacgcttcatgccctttttaaaagattga
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