Helicobacter pylori 2018: hp2018_1416
Help
Entry
hp2018_1416 CDS
T01914
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
hpw
Helicobacter pylori 2018
Pathway
hpw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
hp2018_1416 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpw01007
]
hp2018_1416 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpw03016
]
hp2018_1416 (serS)
Enzymes [BR:
hpw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
hp2018_1416 (serS)
Amino acid related enzymes [BR:
hpw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
hp2018_1416 (serS)
Transfer RNA biogenesis [BR:
hpw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
hp2018_1416 (serS)
Prokaryotic type
hp2018_1416 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Surfac_D-trimer
SCO1-SenC
Motif
Other DBs
NCBI-ProteinID:
ADZ52140
LinkDB
All DBs
Position
complement(1425148..1426395)
Genome browser
AA seq
415 aa
AA seq
DB search
MIDRKLLLQDFDKVALSLKKRNDAMDDELERLREAITHYKKQLIELEGLQAFQNKVSKEF
GIKMAQKMDTSDLKKELENNKIKLNELSKSVGEAEQEMDLKLSIIPNLVDEKTPLGANEE
DNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGLGAKIYRALIY
LMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY
NDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQE
CMLESASEILKALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQ
ARRAKIRFKENQKNQLVHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgattgatagaaaacttttattgcaagattttgacaaggtggctctttctttaaaaaag
cgtaacgatgcgatggacgatgagttggagcgtttgcgcgaagccatcacgcattataaa
aagcaactcattgaattagaaggcttgcaggcctttcaaaacaaggtttctaaagagttt
ggtatcaaaatggctcaaaaaatggatacaagcgatctcaaaaaagagctagaaaacaat
aaaatcaaactgaatgagctttccaaaagcgtgggcgaagcagaacaagaaatggattta
aagctttccataatccctaatctggttgatgaaaaaacccctttaggcgcgaatgaagaa
gacaacatagagattaaaaaaatcctaaccccaagggtttttaatttcaaacccaaagag
cattttgaactcgcccaacaaaacggctggattgattttgaaagcggcgtgaaactcgcc
aaaagccgtttttcggtcattaggggtttgggggcgaaaatttatcgcgcgctcatttat
ttaatgctggattttaatgaaaaaaacggctttgaaatcatctacacgccggcgttagtg
aatgaaaaaatgctttttgggaccgggcaattacccaaattcaaagaagatgttttcaaa
atagaaaatgaaaatttgtatctgatccctaccgctgaagtaacgctcaccaatttatac
aacgacacgattattagcgttgaaaacctccccattaaaatgaccgcgcacacgccttgt
ttcaggagcgaagcagggagcgcgggcaaggatacaagggggatgataagacagcaccag
tttgataaagtagaactagtggctatcacgcaccctaaagaaagcgatgcgatgcaagag
tgcatgctagagagcgcgagcgaaattttaaaggctttggaattaccgcaccggtttgtg
caattgtgtagcggggatttaggctttagcgcgagcaacacgatagatattgaagtgtgg
ctacctgggcaaaattgctacagagagatcagctccgtgtctaacacgagggactttcaa
gctaggcgcgccaaaatccgcttcaaagaaaatcaaaaaaaccaattagtgcacacctta
aacggctcttctttagcggtaggcaggacgatggtcgctttaatggaaaaccaccagcaa
gcggatgggagcattcatattcctaaggcgttagaaaaatacctttaa
DBGET
integrated database retrieval system
