Helicobacter pylori Aklavik117: HPAKL117_03935
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Entry
HPAKL117_03935 CDS
T02352
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPAKL117_03935 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_03935 (uvrC)
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPAKL117_03935 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AFX91189
UniProt:
K7Y5Q3
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All DBs
Position
816292..818076
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AA seq
594 aa
AA seq
DB search
MADLLSSLKNLSHSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSVRNNEITPNYRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACMFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDKLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYSGSNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNETLKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFKLECMPYRVEIFDVSHHANSQCVGGMVVYENHAF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRAQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASEQEKNAVLKKRI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttattgtccagtttgaaaaacctttctcacagcagtggcgtgtatcaatat
tttgataaaaaccgccaattactctatatcggtaaggcgaaaaatttaaaaaagcgcatc
aaaagctatttttctgtccgcaataatgaaatcacgcccaattatcgcgccagcttacgc
atccaaatgatggtcaaacaaatcgcttttttagaaaccattttagtggaaaacgagcaa
gacgctttgattttagaaaattctttaatcaagcagctcaagcccaaatacaacattctt
ttaagagatgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaagatattttagacagcttgtatgaattgctcccgttagttcaaaagaaa
aattgcatcaaggataaaaaggcatgcatgttttatcaaatagagcgttgtaaagcccca
tgcgagaataaaatcaccaaagaagagtatttaaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaaactcatcaaagagcttgaattaaaaatggagcgcctttctaat
aacttgcgttttgaagaagccctcatttatagggacaggattgcaaaaatccaaaaaatc
gccccctttacttgcatggatttagccaaactctatgatttggatatttttgctttttat
agtgggagcaataaggcggtgttagtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactctcttaatgggtttgacactgatgaagcgatgaaacaa
gccattatcaatcattaccaatcgcatttgcctttgatgcctgaacagattttattgaac
gcttgctctaatgaaacgcttaaagaattgcaagaatttatctcccaccaatactctaaa
aaaatcgctcttagtattcctaaaaaaggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaggaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgctcttcaaattagagtgcatgccttatagagtggaaatctttgatgta
agccaccatgccaacagccaatgcgtggggggaatggtcgtgtatgaaaaccatgcattt
caaaaaaactcctatcggcgctaccatttaaaaggctctaatgaatacactcaaatgagc
gaattgctcaccagaagggctttagattttgccaaagagccgccgcctaatttgtgggtg
attgatggagggagagcgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaagcttatcgctctaaa
gggggcgctaaagacattatccacacgcctagcgatacttttaaattgctccctagcgac
aagcgcttgcagtgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggtata
ggagaagccagcgtgaaaaaattgttggattattttgggagttttgaagcgatagaaaaa
gcgagcgagcaggaaaaaaacgccgttttaaaaaaacgaatctaa
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