Helicobacter pylori oki102: HPOKI102_02015
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Entry
HPOKI102_02015 CDS
T03182
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpyb
Helicobacter pylori oki102
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyb03009
]
HPOKI102_02015
Enzymes [BR:
hpyb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPOKI102_02015
Ribosome biogenesis [BR:
hpyb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOKI102_02015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHN34394
LinkDB
All DBs
Position
complement(390201..391082)
Genome browser
AA seq
293 aa
AA seq
DB search
MPFVEEEFEILKPTKALFLVRDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQIIQGVVRLI
YFKPNEKQEKLVFETKDFGAFDKPAQVYTHPKGYFYHESLLDCIQSHLGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALVHGLVEKNMKIDKPILTPQNIQEDLR
IRSQISPLGKPSITLVEPLSYNPFLDISLLKITPLTGRTHQIRLHLSSINHRIVGEGLYG
VADENAREYLQLKRENNAPLLMLHAASLEFEFKGAIYQIASPMPERFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccaccaaagccttgtttttggta
cgcgatgttttaaaatgctctctaaaagaagcccaacggcaccttgacaagcaacgctta
aaacaaaaccaacaagccgtgcgtaaatctcaaatcattcaaggggtcgttcgcttgatt
tatttcaagcctaatgaaaaacaagaaaagcttgtttttgagactaaggattttggcgca
tttgacaaacccgctcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ttagattgcatccaatcgcatttgggtaaaaacgcccacccagcccacagactagactat
gaaacgagcgggttagttttagcgggcaaaaccttacagagcgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtaaaaaaaacttatttagcgctagtgcatgggttggttgaa
aaaaatatgaaaatagacaaacccattctaacgccacaaaacattcaagaagacttgcgc
attcgatctcaaatttctcctttaggcaagccttcaatcacccttgttgagcctttaagc
tataacccttttttggatataagcttgcttaaaataaccccactcactgggcgcacgcac
cagatccgcttgcatttaagcagtataaatcacaggatcgtgggcgagggactttatggg
gtggcagatgaaaacgctagagaataccttcaattaaagcgcgaaaataacgccccttta
ctcatgctccatgccgctagtttagagtttgaatttaaaggggcgatctatcaaatcgct
tccccaatgcccgaacgcttcatgccttttttaaaagattga
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