Helicobacter pylori oki112: HPOKI112_02000
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Entry
HPOKI112_02000 CDS
T03723
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpyc
Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyc03009
]
HPOKI112_02000
Enzymes [BR:
hpyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPOKI112_02000
Ribosome biogenesis [BR:
hpyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOKI112_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHN35865
UniProt:
X2HTT1
LinkDB
All DBs
Position
complement(390587..391468)
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AA seq
293 aa
AA seq
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MPFVEEEFEILKPTKALFLVRDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQIIQGVVRLI
YFKPNEKQEKLVFETKDFGAFDKPAQVYTHPKGYFYHESLLDCIQSHLGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALVHGLVEKNMKIDKPILTPQNIQEDLR
IRSQISPLGKPSITLVEPLSYNPFLDISLLKITPLTGRTHQIRLHLSSINHRIVGEGLYG
VADENAREYLQLKRENNAPLLMLHAASLEFEFKGAIYQIASPMPERFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccaccaaagccttgtttttggta
cgcgatgttttaaaatgctctctaaaagaagcccaacggcaccttgacaagcaacgctta
aaacaaaaccaacaagccgtgcgtaaatctcaaatcattcaaggggtcgttcgcttgatt
tatttcaagcctaatgaaaaacaagaaaagcttgtttttgagactaaggattttggcgca
tttgacaaacccgctcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ttagattgcatccaatcgcatttgggtaaaaacgcccacccagcccacagactagactat
gaaacgagcgggttagttttagcgggcaaaaccttacagagcgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtaaaaaaaacttatttagcgctagtgcatgggttggttgaa
aaaaatatgaaaatagacaaacccattctaacgccacaaaacattcaagaagacttgcgc
attcgatctcaaatttctcctttaggcaagccttcaatcacccttgttgagcctttaagc
tataacccttttttggatataagcttgcttaaaataaccccactcactgggcgcacgcac
cagatccgcttgcatttaagcagtataaatcacaggatcgtgggcgagggactttatggg
gtggcagatgaaaacgctagagaataccttcaattaaagcgcgaaaataacgccccttta
ctcatgctccatgccgctagtttagagtttgaatttaaaggggcgatctatcaaatcgct
tccccaatgcccgaacgcttcatgccttttttaaaagattga
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