Helicobacter pylori oki154: HPOKI154_01830
Help
Entry
HPOKI154_01830 CDS
T03725
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpye03009
]
HPOKI154_01830
Enzymes [BR:
hpye01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPOKI154_01830
Ribosome biogenesis [BR:
hpye03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOKI154_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AHN38711
LinkDB
All DBs
Position
complement(341636..342517)
Genome browser
AA seq
293 aa
AA seq
DB search
MPFVEEEFEILKPIKALFFVHDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVSLI
HFKPNEKTQVLVFETKDFGVFDKPPQVYTHPKGYFYHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALAHGLVDKSIVIDKPILTPQNIQKDLR
IKSKISPLGKPSTTLVEPLSYNPFLNISLLKITPLTGRTHQIRLHLSSVNHRIVGEGLYG
VANEEAREYLQLKRENNAPLLMLHASSLEFEFKGAIYKITSPMPQRFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccattaaagccttgttttttgtg
cacgatgttttaaaatgctctttaaaagaagcccagcgccaccttgacaaacaacgcctg
aaacaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgttagcttgatt
catttcaagcctaatgaaaaaactcaagtgcttgtttttgaaacgaaagattttggcgtg
tttgacaaaccccctcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ctagattgtatccagtcgcattttggcaaaaacgcccacccagcccacagactggattat
gaaacgagcgggttagttttagcaggcaagactttacaaagcgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttatttggcgctagcgcatgggttggttgat
aaaagtatcgtcatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgt
attaaatctaaaatttctcctttaggcaagccttcaaccacgcttgttgagcctttaagc
tataatccttttttaaatataagcttactcaaaataaccccactcaccgggcgcacgcac
cagatccgcttgcatctaagcagcgtgaatcacaggatcgtgggcgaggggctttatggg
gtggctaatgaagaagcgagggaataccttcaattgaagcgtgaaaacaacgccccatta
ctcatgctccatgcttctagtttggaatttgaatttaagggagcgatctataagatcact
tcccccatgccccaacgcttcatgccgtttctaaaagattaa
DBGET
integrated database retrieval system
