Helicobacter pylori oki422: HPOKI422_03345
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Entry
HPOKI422_03345 CDS
T03726
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf00470
D-Amino acid metabolism
hpyf00550
Peptidoglycan biosynthesis
hpyf01100
Metabolic pathways
hpyf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HPOKI422_03345
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPOKI422_03345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HPOKI422_03345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyf01011
]
HPOKI422_03345
Enzymes [BR:
hpyf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HPOKI422_03345
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyf01011
]
Precursor biosynthesis
Amino acid ligase
HPOKI422_03345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
GARS_A
ATPgrasp_TupA
RimK
Motif
Other DBs
NCBI-ProteinID:
AHN40425
LinkDB
All DBs
Position
complement(656944..658014)
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AA seq
356 aa
AA seq
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MQSFLGSLIVEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESN
MHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEF
YRIAFIGPRIEASVLSYSKYLTKLYAKDLGVKTLDYVLLNEKNRANALDLIGFNFPFIVK
PSNAGSSLGVSVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSY
VEEPNKQEFLDFKQKYLDFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFV
IENEVYLNEINPIPGSLANYLFDDFKTTLENLVQSLPKTPKIQIKNSYLLQIQKNK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatcgtttttagggagtttgatcgtggagttttgcgttttatttggtggggcgagt
tttgagcatgaaatcagcattgtgagtgcgatcgcgcttaaaggagtgttaaaagacagg
attaaatattttatttttttagatgaaaaccatcatttttatttgattgaagaatccaac
atgcattcaaaatacttcgctcaaatcaaagaaaaaaaattaccccccctaatcctcaca
cacaatggcttgcttaaaaactcgtttttaggggctaagattatagaattgcctttagtg
atcaatctcgtgcatgggggcgatggcgaagacgggaaattagcgagcttgttagaattt
tatcgtatcgcttttataggccctaggattgaagcgagcgtgttgagttatagcaaatat
ttaaccaagctttatgccaaagatttaggggtgaagactttagattatgttcttttgaat
gaaaaaaaccgcgctaacgccttggatttgattgggtttaatttccctttcattgtgaaa
cccagtaacgccggaagctctttaggagtgagcgttgtgaaagaagaaaaagaattgatt
tacgctttagacagtgcgtttgaatattctaaagaagttttaatagagcctttcattcag
ggcgtgaaagaatacaatttagccggctgtaagatcaaaaaggatttttgtttttcctat
gtggaagagcctaacaaacaggaatttttagatttcaaacaaaaatatttggatttttca
cgcaccaaagcccctaaagcgaatctttctaacgccctagaagagcaattaaaagaaaat
tttaaaaaactctataacgatttgtttgatggcgcgatcattcgttgcgatttttttgtc
atagaaaatgaagtgtatcttaatgagatcaaccccattcctggcagtttggccaattat
ttgtttgatgattttaaaacaactctagaaaatttagtgcaatcattacccaaaacccct
aaaatccaaatcaaaaactcttatttgttgcaaatccaaaagaataagtaa
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