KEGG   Helicobacter pylori oki898: HPOKI898_02930
Entry
HPOKI898_02930    CDS       T03729                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
hpyj  Helicobacter pylori oki898
Pathway
hpyj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hpyj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPOKI898_02930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpyj03400]
    HPOKI898_02930
DNA repair and recombination proteins [BR:hpyj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HPOKI898_02930
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5
Other DBs
NCBI-ProteinID: AHN44709
LinkDB
Position
complement(579229..581028)
AA seq 599 aa
MADLLSSLKNLPNSSGVYQYFDKNRQLLYIGKAKNLKKRIKSYFSICNNEITPNHRASLR
IQMMVKQIAFLETILVENEQDALILENSLIKQLKPKYNILLRDDKTYPYIYMDFSTDFPI
PLITRKILKQPGVKYFGPFTSGAKDILDSLYELLPLVQKKNCIKDKKACIFYQIERCKAP
CENKITKEEYLKIAKECLEMIENKDRLIKELELKMERLSNNLRFEEALIYRDRIAKIQKI
APFTCMDLAKLYDLDIFAFYGASNKAVLVKMFMRGGKIISSAFEKIHSLNGFDTDEAMKQ
AIINHYQSHLPLMPEQILLNACSNEALKELQEFISHQYSKKIALSIPKKGDKLALIEIAM
KNAQEIFSQEKTSNEDLILEEARSLFNLECVPYRVEIFDISHHSNSQCVGGMVVYENNAF
QKNSYRRYHLKGSNEYTQMSELLTRRALDFAKEPPPNLWVIDGGRVQLNIALEILKSSGS
FVEVIAISKEKRDSKAYRSKGGAKDIIHTPSDTFKLLPSDKRLQWVQKLRDESHRYAINF
HRSTKLKNMKQIALLKEKGIGEASVKKLLDYFGSFEAIEKASDQEKKRRFKKTNLKEKA
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggctgatttattgtccagtttgaaaaaccttcctaatagcagtggcgtgtatcaatat
tttgataaaaaccgccaattgctctatatcggtaaagcgaaaaatttaaaaaagcgcatc
aaaagctatttttctatctgcaataatgaaatcacgcccaaccatcgcgcaagcttacga
atccaaatgatggtcaaacaaatcgcttttttagaaacgattttagtggaaaacgagcaa
gacgctttgattttggaaaattctttaatcaagcagctcaagcctaaatacaatattctt
ttaagagatgataaaacttacccttatatttacatggatttttccactgatttccctatc
cctttaatcacacgaaaaattttaaaacagcctggcgttaaatattttggcccttttacg
agcggggctaaggatattttggacagcttgtatgagttgctccctttagttcaaaagaaa
aattgcatcaaggataaaaaggcatgcatattttatcaaatagagcgttgcaaagcccca
tgcgagaataaaatcaccaaagaagagtatttaaaaatcgctaaagaatgtttagaaatg
attgaaaataaagacaggctcatcaaagagcttgaattgaaaatggagcgcctttccaat
aacttgcgttttgaagaagccctaatttacagggacaggattgcaaaaatccaaaaaatc
gcccctttcacttgcatggatttagccaaactctatgatttggacatttttgctttttat
ggcgcgagcaataaggcggtgttagtgaaaatgtttatgcgtgggggtaaaatcatttct
tcagcgtttgaaaaaatccactcccttaatgggtttgacactgatgaggcgatgaaacaa
gccattatcaaccattaccaatcgcatttgcctttgatgcctgaacaaattctattaaac
gcttgttctaatgaagcgcttaaagaattgcaagagtttatctctcatcaatactctaaa
aaaatcgctcttagcattcctaaaaagggcgataagctcgctttaatagaaatcgctatg
aaaaacgctcaagagatttttagccaagaaaaaacctctaatgaagatctgattttagaa
gaagcgcgatcgcttttcaatttagagtgcgtgccttatagggtggaaatctttgacata
agccaccattcaaacagccaatgcgtggggggaatggtcgtgtatgaaaacaatgcattc
caaaaaaactcttaccggcgctaccatttaaaaggctctaacgaatacactcaaatgagc
gaattgctcaccagaagagctttagactttgccaaagagccaccgcctaatttgtgggta
atagatggagggagggtgcaattaaacatcgctttagaaattttaaaaagcagcgggagt
tttgtagaagtgatcgctatttctaaagaaaaaagggattctaaggcttatcgctctaaa
gggggcgctaaagacattatccatacgcctagcgatacttttaaattgctccctagcgac
aaacgcttgcagtgggtgcaaaaattgcgcgatgaaagccaccggtatgcgataaacttc
catagatccactaaacttaaaaacatgaaacaaatcgctcttttaaaagaaaagggtata
ggagaagccagcgtgaaaaaattattggattattttgggagttttgaagcgatagaaaaa
gcgagcgatcaggaaaaaaaacgccgttttaaaaaaacgaatctaaaggaaaaggcatga

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