Helicobacter pylori Aklavik86: HPAKL86_01060
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Entry
HPAKL86_01060 CDS
T02353
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hpyk
Helicobacter pylori Aklavik86
Brite
KEGG Orthology (KO) [BR:
hpyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyk03016
]
HPAKL86_01060 (trmE)
Transfer RNA biogenesis [BR:
hpyk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPAKL86_01060 (trmE)
Prokaryotic type
Methyltransferases
HPAKL86_01060 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
cobW
Ras
Arf
iSTAND
ATP_bind_1
MMR_HSR1_Xtn
ATP-synt_ab_N
AAA_29
FtsK_SpoIIIE
EF-G-binding_N
Roc
Motif
Other DBs
NCBI-ProteinID:
AFX89238
UniProt:
K7Y858
LinkDB
All DBs
Position
complement(193138..194490)
Genome browser
AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISIIKISGNNALSILKQLTQKQDFTPRYAYVRDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLVQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARDNLLKLLASSEVLIDYSEEDIPS
DFLNEVSLNLEKQIASFKDLLDFSNMQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESTDKIERLGIEKSLKSLENCDIVLGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSSLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAVESLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagtattatt
aaaatcagcggcaacaacgctctaagcatcctcaaacaactcacccaaaaacaagacttc
acccccagatacgcttatgtgcgcgatattttttctaatggtgttttattggacaaagcg
ttagtgatttatttcaaagccccctatagtttcaccggcgaagatgtgtgcgaaatccaa
tgccatggaaacccccttttagtgcaaaatatcttacaagcttgtttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggattta
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaagctagagataatctt
ttaaagcttttagccagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttaaatgaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ctggatttttctaacatgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctctttattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcacggataaaatagaacga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacattgttttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaaccttattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcgcccaaactggagcttgaa
atcttaaaatcttatcttaaaatcccttattcttcactagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagcgcctttttccccaaactagacact
caaaacaagctcttactcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttagagcttttttcttatcatctttta
agcgcggtagaaagcttgaacttgctcacccgcccttatgaaaccagccaaatgctagac
agcatgtttagcgaattttgcttgggcaaatga
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