Helicobacter pylori OK310: HPOK310_0349
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Entry
HPOK310_0349 CDS
T02542
Symbol
sfhB
Name
(GenBank) putative pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hpyl
Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyl03009
]
HPOK310_0349 (sfhB)
Enzymes [BR:
hpyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HPOK310_0349 (sfhB)
Ribosome biogenesis [BR:
hpyl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOK310_0349 (sfhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAM97777
LinkDB
All DBs
Position
complement(354615..355496)
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AA seq
293 aa
AA seq
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MPFVEEEFEILKPIKALFFVCDVLKCSLKEAQRHLDKQRLKQNQQAVRKSQMIQGVVSLI
HFKPNEKTQALVFETKDFGVFDKPHQVYTHPKGYFYHESLLDCIQSHFGKNAHPAHRLDY
ETSGLVLAGKTLQSAKDLKALFMQKKVKKTYLALVHGLVDKSIVIDKPILTPQNIQKDLR
IKSKISPLGKPSTTLVEPLSYNPFLDISLLKITPITGRTHQIRLHLSSVNHRIVGEGLYG
VIDENAREYLQLKRENNAPLLMLHATSLEFEFKGAIYKITSPMPKRFMPFLKD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttgttgaagaagaatttgaaattttaaaacccattaaagccttgttttttgtg
tgcgatgttttaaaatgctctttaaaagaagcccagcgccaccttgacaaacaacgccta
aaacaaaaccaacaagccgtgcgtaaatctcaaatgattcaaggggtcgttagcttgatt
catttcaaacctaatgaaaaaactcaagcgcttgtttttgaaacgaaagattttggcgtg
tttgacaaaccccatcaagtctatacccaccctaaaggctatttttaccatgaaagctta
ctggattgtatccagtcgcattttggcaaaaacgcccatccagcccacagactggattat
gaaacgagcgggctagttttagcgggcaagactttacaaagtgctaaggatttaaaagcg
cttttcatgcaaaaaaaagtgaaaaaaacttacttggcgctagtgcatggattagttgat
aaaagtatcgtcatagacaaacccattctaacgccacaaaacattcaaaaagatttgcgt
attaaatctaaaatttctcctttaggcaagccttcaaccacgcttgttgagcctttaagc
tataacccttttttggatataagcttacttaaaattacccccataaccgggcgcacgcac
cagatccgcttgcatttgagcagcgtgaatcacaggatcgtgggtgaggggctttatggg
gtcatagatgaaaacgctagagaatacctccaattaaagcgtgaaaacaacgccccatta
ctcatgctccatgccactagtttggaatttgaatttaagggagcgatctataagatcacc
tcccccatgccaaaacgcttcatgccgtttttaaaagattga
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