Helicobacter pylori OK310: HPOK310_1390
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Entry
HPOK310_1390 CDS
T02542
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpyl
Helicobacter pylori OK310
Brite
KEGG Orthology (KO) [BR:
hpyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyl03032
]
HPOK310_1390
03400 DNA repair and recombination proteins [BR:
hpyl03400
]
HPOK310_1390
Enzymes [BR:
hpyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPOK310_1390
DNA replication proteins [BR:
hpyl03032
]
Prokaryotic type
DNA Topoisomerases
HPOK310_1390
DNA repair and recombination proteins [BR:
hpyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOK310_1390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF4364
Toprim_4
zf-ZPR1
Motif
Other DBs
NCBI-ProteinID:
BAM98818
LinkDB
All DBs
Position
complement(1486968..1488842)
Genome browser
AA seq
624 aa
AA seq
DB search
MKDSVIIIESPNKVAKIKEITGAKVFATIGHFMQLKSYDENNNFKPTFEYDPQKKKRIFE
IIEACKNKKVYIATDPDREGYAIGYHFYEKIKKIASSIYRAEFFEITPSGINKGLQNALL
FENTNKQMYQSALARRVADMLLGFTLSPYLGKALPENEKVSYQIQAKINDNANREVIIKH
CDEKGEEIKFNDKEEALKLFESLEDNKACLLKDLKTSVVETKPKKPFITSTLLERASSEL
GLGIAEVQSLAQSLFEAGLITYIRTDAESLSVEFLNEAESFYLPIYKEVYQKREYKAGKQ
SQAEAHEAIRITHPHKYEDLESIVYNAGITNQDALKLYRLIFERTIESQGKNAIYDKQDL
LFKIKNEYFKCSVKSLKSAGFLAMFSKKELENDESNDDKENKEKEQNAQFNLKIDDMLSL
NDLVLATIKRNAPSPYKEAGFVKLLENKGIGRPSTYASYLPTLLKREYISISQDKKHTIT
PTHKGKRVIEVFENAYQFIIDLTYTKQMEEVLDEIVESKSSYLDFLQNLATKCPKIEKLE
RNDDEIKPSSEGQITYIENILRDLQLDLSEEFKNYKEDNRIAKAFLDRYIKEHEFFRKIT
KRLVALIMTRLDLRHLSKLTLLKY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatagcgttattattattgaaagccctaataaagtggctaagattaaagaaatc
acaggagcaaaggtctttgctaccataggacattttatgcaacttaaaagctatgatgaa
aacaataactttaagccgacctttgaatacgacccacaaaagaaaaaacgtatttttgag
ataatagaggcatgtaaaaataaaaaggtttatattgctactgaccctgatagagagggt
tatgctataggctatcatttttatgaaaagattaaaaaaatagctagttctatttataga
gcggagttttttgaaatcacaccaagtgggattaacaaaggcttacaaaatgctctttta
tttgaaaacactaataagcaaatgtatcaaagtgccttagctagaagagtggctgatatg
cttttaggttttacgctctccccttatttaggtaaggctttaccagaaaatgaaaaagta
agctatcaaatccaagctaagattaacgacaatgctaatagagaagtcatcattaagcat
tgtgatgaaaagggcgaagagattaaattcaatgataaagaagaggctttaaaactcttt
gaaagcttggaagacaataaagcatgtcttttaaaagatttaaaaacctctgttgtagag
accaaacctaaaaagccctttatcacttctacgcttttagaaagagcgagttctgagtta
ggtttaggtatcgctgaagtgcaatctttagctcaaagtctctttgaggctggactaatt
acttatattagaacagatgctgaaagtttgagcgtagagtttttaaatgaggcagagagc
ttttatttgcctatttataaagaagtgtatcaaaaaagagaatacaaggctggtaagcaa
agccaagcagaagctcatgaagccattcgtatcacgcacccccataaatacgaagattta
gaaagcatagtctataatgctggtatcactaatcaagacgctttaaaactctatagattg
atttttgaaagaaccattgaaagtcaaggcaagaatgctatttatgacaaacaagactta
ctctttaaaatcaaaaatgagtattttaaatgttctgtaaagagtttaaaaagcgctggg
tttttagcaatgttttctaaaaaagagctagagaatgatgaaagtaatgatgacaaagaa
aataaagaaaaagagcaaaacgcacaatttaatcttaaaattgatgatatgttaagtcta
aatgacttagttttagctaccattaaaagaaatgccccaagcccttataaagaggcaggt
tttgtcaagcttttagaaaataaaggcataggcagacctagcacttatgcgagttacttg
cctactcttttaaaaagagaatatattagcattagccaagataaaaagcacaccattact
cctacgcataagggtaaaagagtgatagaagtgtttgagaatgcttatcaattcattatt
gatttgacctacaccaaacaaatggaagaagtgctagatgagattgtagaaagtaaaagc
tcatacttagattttttacaaaatttagccactaaatgccctaagattgaaaaactagaa
agaaatgatgatgagataaagcctagtagtgaggggcaaatcacttatatagaaaacatt
ttaagagatttgcaattagacttgagcgaagagtttaaaaactacaaagaagataataga
atagctaaggcatttttagacagatacattaaagagcatgagttttttagaaaaataaca
aaaaggctagtggctttaataatgacgagattagacctgcgacacctaagcaaattaact
ttgctgaaatattag
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